Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT1G08000
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G45170 | GATA transcription factor 14 GATA transcription factor 14 (GATA14); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 5 (TAIR:AT5G66320.2); Has 1632 Blast hits to 1555 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 75; Fungi - 702; Plants - 796; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). Encodes a member of the GATA factor family of zinc finger transcription factors. | 3 | + | View |
| AT2G28340 | GATA transcription factor 13 GATA transcription factor 13 (GATA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 11 (TAIR:AT1G08010.2); Has 1491 Blast hits to 1450 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 612; Plants - 780; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). Encodes a member of the GATA factor family of zinc finger transcription factors. | 2 | + | View |
Orthologs (inter-species colinear regions)
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00065G00050 | No description available. | supercontig_65 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL11G069510 | GATA transcription factor 9 (AHRD V1 *-*- B6STZ1_MAIZE)%3B contains Interpro domain(s) IPR000679 Zinc finger%2C GATA-type | ch11 | - | View |
| SL06G075140 | GATA transcription factor 1 (AHRD V1 *-*- Q0WTQ5_ARATH)%3B contains Interpro domain(s) IPR000679 Zinc finger%2C GATA-type | ch06 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV06G05480 | name=GSVIVG01025199001; | chr6 | + | View |