PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: AT1G07440
Organism: Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AT2G29150	NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29360.1); Has 128631 Blast hits to 128307 proteins in 3642 species: Archae - 1006; Bacteria - 83541; Metazoa - 6111; Fungi - 6791; Plants - 3070; Viruses - 5; Other Eukaryotes - 28107 (source: NCBI BLink). NAD(P)-binding Rossmann-fold superfamily protein	2	-	View

Orthologs (inter-species colinear regions)

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00081G00930	No description available.	supercontig_81	-	View

Musa acuminata

Gene id	Description	Chromosome	Strand	Multiplicon
MA09G03530	CC_gene:gno,CC_gene:Dhrs4,CC_gene:kduD,CC_gene:TR1,CC_gene:TR2,CC_gene:At1g07440,CC_functional_completeness:complete,PRODUCT:Tropinone reductase homolog At1g07440,GO:0055114,GO:0016491,GO:0008152,GO:0005488,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.1.1.206	chr9	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT01G24490	No description available.	Chr01	+	View

Sorghum bicolor

Gene id	Description	Chromosome	Strand	Multiplicon
SB01G039880	No description available.	chr_1	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL09G011130	Dehydrogenase/reductase SDR family member 4 (AHRD V1 *- DHRS4_HUMAN)%3B contains Interpro domain(s) IPR002347 Glucose/ribitol dehydrogenase	ch09	+	View
SL06G005720	Tropinone-reductase-like39 (AHRD V1 **-- B2BXL7_ARALY)%3B contains Interpro domain(s) IPR002347 Glucose/ribitol dehydrogenase	ch06	+	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV06G03030	name=GSVIVG01024899001;	chr6	+	View