Anchorpoints

Gene id
AT1G06040
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G31380salt tolerance homologue (STH); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, protein domain specific binding; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT1G06040.1); Has 1801 Blast hits to 1351 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 1702; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). a B-box zinc finger protein that interacts with COP1. contains a novel 11 amino acid motif at the C-terminus (also found at the N-terminus of HY5) that is involved in the COP1 interaction. salt tolerance homologue2+View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00009G02900No description available.supercontig_9-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G39360B-box zinc finger family protein, putative, expressed2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G13010No description available.Chr07-View
PT17G02830No description available.Chr17+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB06G021170No description available.chr_6-View


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Gene id
Species
Description
Chromosome
Strand