Anchorpoints

Gene id
AT1G05230
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G32370homeodomain GLABROUS 3 Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Together with ATML1 and PDF2, it is involved in cotyledon development. homeodomain GLABROUS 3 (HDG3); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, cotyledon development; LOCATED IN: nucleus; EXPRESSED IN: fruit; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 2 (TAIR:AT1G05230.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).2+View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00008G02140No description available.supercontig_8-View
CP00097G00470No description available.supercontig_97-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_04G45660No description available.Chr04-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G23020No description available.Chr02-View
PT14G15200No description available.Chr14+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G005830Homeobox-leucine zipper protein ATHB-15 (AHRD V1 ***- ATB15_ARATH)%3B contains Interpro domain(s) IPR002913 Lipid-binding STARTch12+View


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Gene id
Species
Description
Chromosome
Strand