Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT1G04500
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G33350 | CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT1G04500.1); Has 8037 Blast hits to 5335 proteins in 176 species: Archae - 8; Bacteria - 26; Metazoa - 23; Fungi - 132; Plants - 1672; Viruses - 0; Other Eukaryotes - 6176 (source: NCBI BLink). CCT motif family protein | 2 | + | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD1G75760 | No description available. | Bd1 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00044G00050 | No description available. | supercontig_44 | + | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA08G13040 | CC_gene:COL2,CC_gene:PRR37,CC_gene:APRR1,CC_gene:COL5,CC_gene:PRR1,CC_gene:COL3,CC_gene:COL4,CC_functional_completeness:fragment,PRODUCT:Putative Whole genome shotgun sequence of line PN40024%2C scaffold_49.assembly12x (Fragment),CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr8 | - | View |
| MA11G02560 | CC_gene:HD1,CC_gene:APRR1,CC_gene:COL2,CC_gene:COL1,CC_gene:CO,CC_gene:COL5,CC_gene:COL3,CC_gene:COL4,CC_functional_completeness:fragment,PRODUCT:CCT motif family protein%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr11 | + | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS03G04620 | CCT motif family protein, expressed | 3 | - | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_03G03700 | No description available. | Chr03 | - | View |
| OSINDICA_10G23310 | No description available. | Chr10 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT08G17150 | No description available. | Chr08 | - | View |
| PT10G06610 | No description available. | Chr10 | + | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB01G047650 | No description available. | chr_1 | + | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI009G56250 | No description available. | scaffold_9 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL09G090650 | Zinc finger protein CONSTANS-LIKE 5 (AHRD V1 *--- COL5_ARATH)%3B contains Interpro domain(s) IPR010402 CCT domain | ch09 | - | View |
| SL12G096940 | CCT motif family protein (AHRD V1 *-*- B6TX69_MAIZE)%3B contains Interpro domain(s) IPR010402 CCT domain | ch12 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV05G08930 | name=GSVIVG01027910001; | chr5 | - | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM01G03040 | No description available. | 1 | - | View |
| ZM09G28260 | No description available. | 9 | - | View |