Anchorpoints

Gene id
AT1G03880
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G44120CRUCIFERINA (CRA1); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell, seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: cruciferin 2 (TAIR:AT1G03880.1); Has 1047 Blast hits to 1009 proteins in 168 species: Archae - 0; Bacteria - 115; Metazoa - 2; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. RmlC-like cupins superfamily protein5-View
AT4G28520Encodes a 12S seed storage protein that is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. cruciferin 3 (CRU3); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to abscisic acid stimulus, embryo development ending in seed dormancy; LOCATED IN: protein body; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: 11-S seed storage protein, conserved site (InterPro:IPR022379), Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), 11-S seed storage protein, plant (InterPro:IPR006044); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G44120.3); Has 6518 Blast hits to 3043 proteins in 462 species: Archae - 6; Bacteria - 857; Metazoa - 718; Fungi - 277; Plants - 2299; Viruses - 10; Other Eukaryotes - 2351 (source: NCBI BLink). cruciferin 34+View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00165G00070No description available.supercontig_165+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G090150Legumin 11S-globulin (AHRD V1 **-- Q39770_GINBI)%3B contains Interpro domain(s) IPR014710 RmlC-like jelly roll foldch09-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G10960name=GSVIVG01028337001;chr7+View


Download

Gene id
Species
Description
Chromosome
Strand