Anchorpoints
- Gene id
- AT1G02980
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G02570 | Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response. cullin 1 (CUL1); CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin homology (InterPro:IPR016158), Cullin, N-terminal (InterPro:IPR001373), Cullin, conserved site (InterPro:IPR016157), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1); Has 2243 Blast hits to 2199 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 958; Fungi - 500; Plants - 373; Viruses - 0; Other Eukaryotes - 412 (source: NCBI BLink). cullin 1 | 4 | + | View |
Orthologs (inter-species colinear regions)
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00009G01820 | No description available. | supercontig_9 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA01G27770 | CC_gene:CUL4A,CC_gene:cul3a,CC_gene:Cul3,CC_gene:culC,CC_gene:At1g43140,CC_gene:CUL2,CC_gene:CUL1,CC_functional_completeness:complete,PRODUCT:Cullin-1,GO:0031625,GO:0031461,GO:0006511,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr1 | + | View |
MA07G03780 | CC_gene:CUL3B,CC_gene:CUL3A,CC_gene:CUL4A,CC_gene:At1g59790,CC_gene:culC,CC_gene:At1g43140,CC_gene:CUL2,CC_gene:CUL1,CC_functional_completeness:complete,PRODUCT:Cullin-1,GO:0031625,GO:0031461,GO:0006511,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr7 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS01G70920 | cullin-1, putative, expressed | 1 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G074680 | Cullin 1B (AHRD V1 ***- Q711G7_TOBAC)%3B contains Interpro domain(s) IPR001373 Cullin%2C N-terminal | ch09 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV07G03630 | name=GSVIVG01010966001; | chr7 | + | View |