Anchorpoints

Gene id
AT1G02780
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G02230Ribosomal protein L19e family protein Ribosomal protein L19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19/L19e (InterPro:IPR000196), Ribosomal protein L19/L19e, domain 3 (InterPro:IPR015974), Ribosomal protein L19/L19e, domain 1 (InterPro:IPR015972); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19e family protein (TAIR:AT3G16780.1); Has 1139 Blast hits to 1139 proteins in 410 species: Archae - 291; Bacteria - 0; Metazoa - 317; Fungi - 168; Plants - 158; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink).4-View
AT4G16030Ribosomal protein L19e family protein Ribosomal protein L19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19/L19e (InterPro:IPR000196); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19e family protein (TAIR:AT3G16780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).4+View


Orthologs (inter-species colinear regions)

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G075430Ribosomal protein L19 (AHRD V1 ***- Q2PYW9_SOLTU)%3B contains Interpro domain(s) IPR000196 Ribosomal protein L19/L19ech09+View
SL06G009210Ribosomal protein L19 (AHRD V1 ***- Q2PYW9_SOLTU)%3B contains Interpro domain(s) IPR000196 Ribosomal protein L19/L19ech06+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G12350name=GSVIVG01035096001;chr5-View
VV07G08710name=GSVIVG01028052001;chr7+View


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Gene id
Species
Description
Chromosome
Strand