Anchorpoints

Gene id
AT1G01120
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G46720Encodes KCS13, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 13 (KCS13); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: fatty acid elongation, very long-chain fatty acid metabolic process, cuticle development; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: ovule, rosette leaf, fruit, cauline leaf, flower; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 14 (TAIR:AT3G10280.1); Has 3894 Blast hits to 3878 proteins in 958 species: Archae - 0; Bacteria - 1429; Metazoa - 0; Fungi - 9; Plants - 2321; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). 3-ketoacyl-CoA synthase 132+View


Orthologs (inter-species colinear regions)

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G17800No description available.Chr02+View
PT14G10430No description available.Chr14+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G009240Fatty acid elongase 3-ketoacyl-CoA synthase (AHRD V1 **** Q6DUV6_BRANA)%3B contains Interpro domain(s) IPR012392 Very-long-chain 3-ketoacyl-CoA synthasech10-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G07320name=GSVIVG01027424001;chr15-View


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Gene id
Species
Description
Chromosome
Strand