Anchorpoints

Gene id
AT1G01060
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G46830Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis. circadian clock associated 1 circadian clock associated 1 (CCA1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G01060.3); Has 3942 Blast hits to 2101 proteins in 266 species: Archae - 5; Bacteria - 79; Metazoa - 414; Fungi - 218; Plants - 1144; Viruses - 7; Other Eukaryotes - 2075 (source: NCBI BLink).2+View


Orthologs (inter-species colinear regions)

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G07580name=GSVIVG01027456001;chr15-View


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Gene id
Species
Description
Chromosome
Strand