Integrative Orthology Viewer: ZM08G18540 (Zea mays)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Zea mays | Orthologous gene family | ZM06G27330 ZM08G15910 ZM08G18540 | 3 | |
Anchor point | ZM06G27330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | ZM08G18540 | 1 | ||
Tree-based ortholog | ZM08G18540 ZM06G27330 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G07050 | 1 | |
Anchor point | 1-to-1 | AT3G56620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G07050 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G07050 | 1 | ||
Brachypodium distachyon | Orthologous gene family | many-to-1 | BD2G52680 | 1 | |
Anchor point | 1-to-1 | BD2G21260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G52680 | 1 | ||
Tree-based ortholog | many-to-many | BD2G21260 BD2G21310 | 2 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00092G00630 | 1 | |
Tree-based ortholog | many-to-1 | CP01046G00010 | 1 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV39242G00010 HV58978G00010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV58978G00010 | 1 | ||
Tree-based ortholog | many-to-1 | HV58978G00010 | 1 | ||
Musa acuminata | Anchor point | 1-to-1 | MA06G16470 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA10G01420 MA09G17800 MA06G08650 ... | 4 | ||
Tree-based ortholog | many-to-many | MA04G00260 MA07G21750 | 2 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_01G55890 OSINDICA_05G30310 | 2 | |
Anchor point | 1-to-1 | OSINDICA_05G37090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_01G55890 | 1 | ||
Tree-based ortholog | many-to-1 | OSINDICA_05G37090 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G58910 OS05G33900 | 2 | |
Anchor point | 1-to-many | OS01G58910 OS05G41420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G41420 | 1 | ||
Tree-based ortholog | many-to-1 | OS05G41420 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00046G00140 PP00032G00340 PP00040G00770 ... | 4 | |
Tree-based ortholog | many-to-many | PP00294G00080 PP00040G00770 PP00032G00340 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT06G03350 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G03350 PT16G03140 | 2 | ||
Tree-based ortholog | many-to-many | PT03G19250 PT01G03250 | 2 | ||
Setaria italica | Orthologous gene family | many-to-1 | SI003G24750 | 1 | |
Anchor point | 1-to-1 | SI003G19700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI003G19700 | 1 | ||
Tree-based ortholog | many-to-1 | SI003G19700 | 1 | ||
Solanum lycopersicum | Anchor point | 1-to-1 | SL10G078270 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G078270 | 1 | ||
Tree-based ortholog | many-to-many | SL10G080980 SL10G080990 SL10G078270 | 3 | ||
Sorghum bicolor | Orthologous gene family | many-to-1 | SB09G020200 | 1 | |
Anchor point | 1-to-1 | SB09G024200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB09G024200 | 1 | ||
Tree-based ortholog | many-to-1 | SB09G024200 | 1 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G03780 | 1 | |
Tree-based ortholog | many-to-1 | VV13G12190 | 1 |