Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ZM07G28430
(Zea mays)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Zea mays | Orthologous gene family | ZM07G28430 | 1 |  |
| Anchor point | ZM01G16420 ZM02G39540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | ZM07G28430 | 1 | ||
| Tree-based ortholog | ZM02G39540 ZM07G28430 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | many-to-1 | AT3G17440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT3G17440 AT1G48240 | 2 | ||
| Tree-based ortholog | many-to-1 | AT3G17440 | 1 | ||
| Brachypodium distachyon | Anchor point | many-to-many | BD1G20080 BD1G61510 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G20080 | 1 | ||
| Carica papaya | Anchor point | many-to-1 | CP00146G00290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00146G00290 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00146G00290 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G07000 | 1 | |
| Hordeum vulgare | Orthologous gene family | 1-to-1 | HV40999G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV40999G00020 | 1 | ||
| Tree-based ortholog | many-to-1 | HV40999G00020 | 1 | ||
| Musa acuminata | Anchor point | many-to-1 | MA11G21510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA05G21570 MA11G21510 MA02G07890 | 3 | ||
| Tree-based ortholog | many-to-many | MA02G07890 MA11G21510 | 2 | ||
| Oryza sativa ssp. indica | Anchor point | many-to-many | OSINDICA_03G24200 OSINDICA_07G36250 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G24200 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS07G44350 | 1 | |
| Anchor point | many-to-many | OS07G44350 OS03G25390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G44350 | 1 | ||
| Tree-based ortholog | many-to-1 | OS07G44350 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL21G01430 OL13G01550 | 2 | |
| Tree-based ortholog | many-to-1 | OL13G01550 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00105G00690 | 1 | |
| Tree-based ortholog | many-to-many | PP00105G00690 PP00090G00460 PP00059G00450 | 3 | ||
| Populus trichocarpa | Anchor point | many-to-1 | PT10G00190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G00190 | 1 | ||
| Tree-based ortholog | many-to-1 | PT10G00190 | 1 | ||
| Setaria italica | Anchor point | many-to-many | SI002G41600 SI009G40440 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI002G41600 | 1 | ||
| Tree-based ortholog | many-to-1 | SI009G40440 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G098950 | 1 | |
| Tree-based ortholog | many-to-1 | SL12G098950 | 1 | ||
| Sorghum bicolor | Orthologous gene family | 1-to-1 | SB02G040620 | 1 | |
| Anchor point | many-to-many | SB02G040620 SB01G034400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB02G040620 | 1 | ||
| Tree-based ortholog | many-to-1 | SB02G040620 | 1 | ||
| Vitis vinifera | Anchor point | many-to-1 | VV05G02430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G02430 | 1 | ||
| Tree-based ortholog | many-to-1 | VV02G03240 | 1 |