Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ZM05G39560
(Zea mays)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Zea mays | Orthologous gene family | ZM04G24220 ZM05G39560 | 2 |  |
| Anchor point | ZM04G24220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ZM05G39560 | 1 | ||
| Tree-based ortholog | ZM04G24220 ZM05G39560 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G68070 | 1 | |
| Tree-based ortholog | many-to-many | AT2G01735 AT1G68070 | 2 | ||
| Brachypodium distachyon | Anchor point | 1-to-1 | BD3G59936 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G59936 | 1 | ||
| Tree-based ortholog | many-to-1 | BD3G59936 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00002G01820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00002G01820 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00002G01820 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR11G03690 | 1 | |
| Tree-based ortholog | many-to-many | CR11G03690 CR16G02120 | 2 | ||
| Hordeum vulgare | Orthologous gene family | many-to-1 | HV137230G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV137230G00010 | 1 | ||
| Tree-based ortholog | many-to-1 | HV137230G00010 | 1 | ||
| Musa acuminata | Orthologous gene family | many-to-1 | MA07G02510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA07G02510 | 1 | ||
| Tree-based ortholog | many-to-many | MA09G28010 MA07G02510 | 2 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-1 | OSINDICA_02G48550 | 1 | |
| Anchor point | 1-to-1 | OSINDICA_02G48550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_02G48550 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_02G48550 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS02G50290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G45240 | 1 | ||
| Tree-based ortholog | many-to-1 | OS02G50290 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL16G00600 | 1 | |
| Tree-based ortholog | many-to-1 | OL16G00600 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00399G00070 PP00013G01060 | 2 | |
| Tree-based ortholog | many-to-many | PP00013G01060 PP00399G00070 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT08G13490 PT10G10630 | 2 | |
| Anchor point | 1-to-many | PT08G13490 PT10G10630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G13490 PT10G10630 | 2 | ||
| Tree-based ortholog | many-to-many | PT08G13490 PT10G10630 | 2 | ||
| Setaria italica | Orthologous gene family | many-to-1 | SI001G32370 | 1 | |
| Anchor point | 1-to-1 | SI001G32370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI001G32370 | 1 | ||
| Tree-based ortholog | many-to-1 | SI001G32370 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL04G008020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G008020 | 1 | ||
| Tree-based ortholog | many-to-1 | SL04G008020 | 1 | ||
| Sorghum bicolor | Anchor point | 1-to-1 | SB04G028660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB04G028660 | 1 | ||
| Tree-based ortholog | many-to-1 | SB04G028660 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV01G05860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G05860 | 1 | ||
| Tree-based ortholog | many-to-1 | VV01G05860 | 1 |