Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ZM02G24860
(Zea mays)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Zea mays | Orthologous gene family | ZM02G24860 | 1 |  |
| Anchor point | ZM04G29450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ZM02G24860 ZM04G29450 | 2 | ||
| Tree-based ortholog | ZM02G24860 ZM04G29450 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G05690 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G05690 | 1 | ||
| Tree-based ortholog | many-to-1 | AT5G05690 | 1 | ||
| Brachypodium distachyon | Anchor point | 1-to-1 | BD4G43110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G43110 | 1 | ||
| Tree-based ortholog | many-to-1 | BD4G43110 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00019G01800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00019G01800 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00019G01800 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR11G00060 | 1 | |
| Tree-based ortholog | many-to-many | CR10G02070 CR17G07860 CR07G02810 | 3 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1559549G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV1559549G00010 | 1 | ||
| Musa acuminata | Orthologous gene family | 1-to-1 | MA03G09030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA03G09030 MA08G00150 | 2 | ||
| Tree-based ortholog | many-to-many | MA08G00150 MA03G09030 | 2 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-many | OSINDICA_12G03440 OSINDICA_11G03200 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_12G03440 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_12G03440 OSINDICA_11G03200 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS11G04710 OS12G04480 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS12G04480 | 1 | ||
| Tree-based ortholog | many-to-many | OS12G04480 OS11G04710 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G05650 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00024G01110 PP00083G00270 PP00281G00510 | 3 | |
| Tree-based ortholog | many-to-many | PP00024G01110 PP00083G00270 PP00281G00510 | 3 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT10G18980 PT08G06750 | 2 | |
| Tree-based ortholog | many-to-many | PT10G18980 PT08G06750 | 2 | ||
| Setaria italica | Anchor point | 1-to-many | SI008G02640 SI007G32560 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SI008G02640 SI007G32560 | 2 | ||
| Tree-based ortholog | many-to-many | SI007G32560 SI008G02640 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL06G051750 | 1 | |
| Tree-based ortholog | many-to-1 | SL06G051750 | 1 | ||
| Sorghum bicolor | Anchor point | 1-to-1 | SB05G002580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB05G002580 | 1 | ||
| Tree-based ortholog | many-to-1 | SB05G002580 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV13G10590 | 1 | |
| Tree-based ortholog | many-to-1 | VV13G10590 | 1 |