Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ZM01G19550
(Zea mays)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Zea mays | Orthologous gene family | ZM01G01270 ZM01G19550 ZM02G07300 ... | 6 |  |
| Anchor point | ZM01G01270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | ZM01G19550 | 1 | ||
| Tree-based ortholog | ZM01G19550 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G04110 | 1 | |
| Tree-based ortholog | 1-to-1 | AT1G04110 | 1 | ||
| Brachypodium distachyon | Orthologous gene family | many-to-1 | BD5G24780 | 1 | |
| Anchor point | 1-to-many | BD3G31690 BD1G77260 BD5G18910 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G31690 | 1 | ||
| Tree-based ortholog | 1-to-many | BD4G11640 BD1G17320 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP00029G00440 CP00029G00430 | 2 | |
| Tree-based ortholog | 1-to-many | CP00029G00430 CP00029G00420 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G00900 | 1 | |
| Hordeum vulgare | Orthologous gene family | many-to-many | HV1570361G00010 HV37829G00010 HV41676G00020 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV49190G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | HV37829G00010 | 1 | ||
| Musa acuminata | Orthologous gene family | many-to-1 | MA11G22210 | 1 | |
| Anchor point | 1-to-many | MA08G12460 MA11G03160 MA05G20720 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA07G19280 | 1 | ||
| Tree-based ortholog | 1-to-many | MA11G03170 MA11G03160 MA02G00500 ... | 4 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_02G42900 OSINDICA_07G40600 OSINDICA_12G15370 | 3 | |
| Anchor point | 1-to-many | OSINDICA_03G01750 OSINDICA_10G28460 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_10G28460 | 1 | ||
| Tree-based ortholog | 1-to-many | OSINDICA_03G29940 OSINDICA_07G40600 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G44590 OS05G30580 OS10G38080 | 3 | |
| Anchor point | 1-to-many | OS04G48416 OS10G38080 OS03G02750 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G38080 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS10G38080 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00028G00460 PP00019G00980 | 2 | |
| Tree-based ortholog | 1-to-many | PP00163G00250 PP00007G01310 PP00065G01600 | 3 | ||
| Populus trichocarpa | Anchor point | 1-to-1 | PT02G15190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT03G11870 | 1 | ||
| Tree-based ortholog | 1-to-many | PT03G11870 PT03G11850 PT03G11880 | 3 | ||
| Setaria italica | Orthologous gene family | many-to-many | SI001G27540 SI003G32550 SI003G35960 ... | 7 | |
| Anchor point | 1-to-many | SI009G35880 SI009G58320 SI007G21200 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G35880 | 1 | ||
| Tree-based ortholog | 1-to-1 | SI009G58320 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL01G091920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL08G007680 SL08G079900 SL08G079920 ... | 17 | ||
| Tree-based ortholog | 1-to-many | SL08G079990 SL08G080010 SL02G072290 ... | 21 | ||
| Sorghum bicolor | Orthologous gene family | many-to-many | SB01G031090 SB08G017330 SB08G017490 | 3 | |
| Anchor point | 1-to-many | SB06G025980 SB01G031090 SB01G049280 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G031090 | 1 | ||
| Tree-based ortholog | 1-to-1 | SB01G031090 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G11740 | 1 | |
| Tree-based ortholog | 1-to-1 | VV02G07600 | 1 |