Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
VV00G23980
(Vitis vinifera)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Vitis vinifera | Orthologous gene family | VV00G23980 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | VV00G23980 | 1 | ||
| Tree-based ortholog | VV00G23980 VV12G11270 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G62360 | 1 | |
| Tree-based ortholog | many-to-1 | AT1G62360 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G57607 | 1 | |
| Tree-based ortholog | many-to-many | BD1G10047 BD1G12690 BD1G12677 ... | 5 | ||
| Carica papaya | Anchor point | N/A | CP00152G00550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00152G00550 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00152G00560 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR08G04920 | 1 | |
| Tree-based ortholog | many-to-1 | CR08G04920 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV1561605G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV1561605G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA04G33180 MA04G29090 MA06G04760 ... | 4 | |
| Tree-based ortholog | many-to-many | MA03G26910 MA08G05250 MA07G28200 ... | 12 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_07G02580 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_03G50040 OSINDICA_03G50080 OSINDICA_03G45270 ... | 7 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G51690 | 1 | |
| Tree-based ortholog | many-to-many | OS03G51690 OS03G47036 OS03G47016 ... | 7 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G04210 | 1 | |
| Tree-based ortholog | many-to-1 | OL04G04210 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00235G00110 PP00033G01710 | 2 | |
| Tree-based ortholog | many-to-many | PP00235G00110 PP00033G01710 | 2 | ||
| Populus trichocarpa | Anchor point | N/A | PT11G01110 PT04G00430 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G00470 PT11G01110 | 2 | ||
| Tree-based ortholog | many-to-many | PT11G01110 PT04G00470 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G14360 | 1 | |
| Tree-based ortholog | many-to-many | SI009G10920 SI009G07280 SI009G14360 ... | 5 | ||
| Solanum lycopersicum | Anchor point | N/A | SL02G081120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G081120 | 1 | ||
| Tree-based ortholog | many-to-1 | SL02G081120 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB02G002200 | 1 | |
| Tree-based ortholog | many-to-many | SB01G009480 SB01G012200 SB01G006790 ... | 5 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G01230 | 1 | |
| Tree-based ortholog | many-to-many | ZM01G51490 ZM05G06550 ZM01G47840 ... | 6 |