Integrative Orthology Viewer: SL12G014500 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL12G014500 | 1 | |
Anchor point | SL07G064990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | SL07G064990 SL12G014500 | 2 | ||
Tree-based ortholog | SL07G064990 SL12G014500 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT5G55250 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G55250 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G55250 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G44620 | 1 | |
Tree-based ortholog | many-to-many | BD1G44620 BD4G08320 BD1G42760 ... | 12 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00012G02360 | 1 | |
Tree-based ortholog | many-to-1 | CP00012G02360 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV134705G00010 | 1 | |
Tree-based ortholog | many-to-many | HV135927G00010 HV1559702G00010 HV134705G00010 ... | 8 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA01G20260 MA01G20270 | 2 | |
Tree-based ortholog | many-to-many | MA01G20260 MA01G20270 | 2 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_04G49070 | 1 | |
Tree-based ortholog | many-to-1 | OSINDICA_04G49070 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G56950 | 1 | |
Tree-based ortholog | many-to-1 | OS04G56950 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00204G00160 PP00327G00170 | 2 | |
Tree-based ortholog | many-to-many | PP00204G00160 PP00327G00170 | 2 | ||
Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT01G35900 | 1 | |
Tree-based ortholog | many-to-1 | PT01G35900 | 1 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G29220 | 1 | |
Tree-based ortholog | many-to-many | SI003G11550 SI004G10790 SI004G10800 ... | 16 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G032230 | 1 | |
Tree-based ortholog | many-to-many | SB09G000290 SB03G008780 SB03G008800 ... | 19 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV19G11160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV19G11160 | 1 | ||
Tree-based ortholog | many-to-1 | VV19G11160 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM04G31790 ZM04G31770 ZM04G31780 | 3 | |
Tree-based ortholog | many-to-many | ZM06G05880 ZM09G00370 ZM09G00380 ... | 15 |