Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL12G008830
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL07G038160 SL12G008830 | 2 |  |
| Anchor point | SL07G038160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SL12G008830 SL07G038160 | 2 | ||
| Tree-based ortholog | SL07G038160 SL12G008830 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT4G26150 | 1 | |
| Anchor point | 1-to-many | AT4G26150 AT5G56860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT4G26150 AT5G56860 | 2 | ||
| Tree-based ortholog | many-to-many | AT4G26150 AT5G56860 | 2 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G37480 | 1 | |
| Tree-based ortholog | many-to-many | BD2G45750 BD2G14890 | 2 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00093G00210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00093G00210 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00093G00210 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR07G01720 CR08G00240 CR08G00230 | 3 | |
| Tree-based ortholog | many-to-1 | CR07G01720 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1558911G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV136200G00010 HV46658G00010 | 2 | ||
| Musa acuminata | Orthologous gene family | many-to-1 | MA02G17100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA04G31740 MA02G17100 MA02G16090 ... | 4 | ||
| Tree-based ortholog | many-to-many | MA02G17100 MA07G09270 MA10G28130 | 3 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_06G33100 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_05G43480 OSINDICA_01G44760 OSINDICA_07G12600 | 3 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G37450 | 1 | |
| Tree-based ortholog | many-to-many | OS05G49280 OS01G47360 OS05G50270 | 3 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL02G01440 | 1 | |
| Tree-based ortholog | many-to-1 | OL02G01440 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00121G00140 PP00167G00700 PP00003G01150 ... | 4 | |
| Tree-based ortholog | many-to-many | PP00121G00140 PP00003G01150 PP00121G00170 ... | 4 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT18G05360 PT06G22920 | 2 | |
| Tree-based ortholog | many-to-many | PT06G22920 PT18G05360 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI004G24180 | 1 | |
| Tree-based ortholog | many-to-many | SI003G14250 SI003G13430 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB10G022580 | 1 | |
| Tree-based ortholog | many-to-many | SB09G028850 SB03G030310 SB09G029510 | 3 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV04G08370 VV11G03600 | 2 | |
| Anchor point | 1-to-1 | VV11G03600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV11G03600 | 1 | ||
| Tree-based ortholog | many-to-1 | VV11G03600 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM09G12620 | 1 | |
| Tree-based ortholog | many-to-many | ZM03G35640 ZM06G31950 ZM08G11260 | 3 |