Integrative Orthology Viewer: SL12G005390 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL12G005390 | 1 | |
Anchor point | SL07G063630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | SL12G005390 SL07G063630 | 2 | ||
Tree-based ortholog | SL12G005390 SL07G063630 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT4G21450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G21450 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G54110 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G14790 | 1 | |
Tree-based ortholog | many-to-many | BD1G24850 BD3G14790 | 2 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00012G00370 | 1 | |
Tree-based ortholog | many-to-1 | CP00012G00370 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV47987G00020 | 1 | |
Tree-based ortholog | many-to-many | HV39318G00010 HV47987G00020 | 2 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA03G23580 | 1 | |
Tree-based ortholog | many-to-many | MA04G24480 MA11G15190 MA11G15060 ... | 6 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_08G03630 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_07G29660 OSINDICA_08G03630 | 2 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G04620 | 1 | |
Tree-based ortholog | many-to-many | OS07G37270 OS08G04620 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00266G00070 PP00167G00100 PP00019G00880 | 3 | |
Tree-based ortholog | many-to-many | PP00266G00070 PP00167G00100 PP00019G00880 ... | 4 | ||
Populus trichocarpa | Anchor point | 1-to-1 | PT01G40820 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT11G04190 PT04G03350 | 2 | ||
Tree-based ortholog | many-to-many | PT01G40820 PT11G12620 | 2 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI006G06640 | 1 | |
Tree-based ortholog | many-to-many | SI002G36060 SI006G06640 | 2 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB07G003060 | 1 | |
Tree-based ortholog | many-to-many | SB02G036280 SB07G003060 | 2 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV12G09040 | 1 | |
Tree-based ortholog | many-to-1 | VV19G03750 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM04G07910 ZM10G10970 | 2 | |
Tree-based ortholog | many-to-many | ZM10G10970 ZM04G07910 ZM04G09870 | 3 |