Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL11G010110
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL11G010110 | 1 |  |
| Anchor point | SL05G051520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SL11G010110 SL05G051520 | 2 | ||
| Tree-based ortholog | SL05G051520 SL11G010110 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-many | AT4G40000 AT2G22400 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G22400 | 1 | ||
| Tree-based ortholog | many-to-many | AT4G40000 AT2G22400 | 2 | ||
| Brachypodium distachyon | Anchor point | 1-to-1 | BD3G38650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G32840 | 1 | ||
| Tree-based ortholog | many-to-many | BD4G32840 BD3G38660 BD3G38650 | 3 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00055G00800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00055G00800 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00055G00800 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G08540 | 1 | |
| Tree-based ortholog | many-to-1 | CR10G03560 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV47687G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV6825G00010 HV47687G00010 | 2 | ||
| Musa acuminata | Anchor point | 1-to-1 | MA07G19570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA07G19570 | 1 | ||
| Tree-based ortholog | many-to-1 | MA07G19570 | 1 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_09G23820 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_09G23820 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_09G23820 OSINDICA_08G36080 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS09G29630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G29630 | 1 | ||
| Tree-based ortholog | many-to-many | OS09G29630 OS08G37780 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL13G01690 OL21G01290 | 2 | |
| Tree-based ortholog | many-to-many | OL13G01690 OL21G01290 OL04G00820 ... | 5 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00083G01030 | 1 | |
| Tree-based ortholog | many-to-1 | PP00083G01030 | 1 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT07G09610 PT05G07290 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT07G09610 | 1 | ||
| Tree-based ortholog | many-to-many | PT07G09610 PT05G07290 | 2 | ||
| Setaria italica | Anchor point | 1-to-many | SI002G24610 SI006G18810 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI002G24610 | 1 | ||
| Tree-based ortholog | many-to-many | SI002G24610 SI006G18810 SI006G18820 | 3 | ||
| Sorghum bicolor | Anchor point | 1-to-1 | SB07G029085 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB02G027340 | 1 | ||
| Tree-based ortholog | many-to-many | SB02G027340 SB07G029085 | 2 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV07G02620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G02620 | 1 | ||
| Tree-based ortholog | many-to-1 | VV07G02620 | 1 | ||
| Zea mays | Anchor point | 1-to-1 | ZM07G16910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G16910 | 1 | ||
| Tree-based ortholog | many-to-many | ZM07G16910 ZM01G31020 | 2 |