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Integrative Orthology Viewer:
SL10G080550
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL10G080550 | 1 |  |
| Anchor point | SL10G078910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SL10G078910 SL10G080550 | 2 | ||
| Tree-based ortholog | SL10G080550 SL10G078910 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-many | AT3G12060 AT5G06700 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT3G12060 AT5G06700 | 2 | ||
| Tree-based ortholog | many-to-many | AT3G12060 AT5G06700 | 2 | ||
| Brachypodium distachyon | Anchor point | 1-to-1 | BD1G46280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G46280 | 1 | ||
| Tree-based ortholog | many-to-many | BD1G46280 BD3G57480 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00085G00580 | 1 | |
| Tree-based ortholog | many-to-1 | CP00085G00580 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV58238G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV58238G00010 HV1568649G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA09G16080 MA03G07860 | 2 | |
| Tree-based ortholog | many-to-many | MA03G07860 MA09G16080 MA08G23390 | 3 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_06G09950 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_06G09950 OSINDICA_02G51740 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS06G10560 | 1 | |
| Tree-based ortholog | many-to-many | OS06G10560 OS02G53380 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00057G00940 PP00309G00410 PP00004G00340 ... | 5 | |
| Tree-based ortholog | many-to-many | PP00309G00410 PP00390G00110 PP00057G00940 ... | 6 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT06G19390 PT03G20160 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT06G19390 PT16G05930 | 2 | ||
| Tree-based ortholog | many-to-many | PT06G19390 PT16G05930 | 2 | ||
| Setaria italica | Anchor point | 1-to-1 | SI002G20300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI004G08500 | 1 | ||
| Tree-based ortholog | many-to-many | SI004G08500 SI001G35160 | 2 | ||
| Sorghum bicolor | Anchor point | 1-to-1 | SB04G034670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB10G006800 | 1 | ||
| Tree-based ortholog | many-to-many | SB10G006800 SB04G034670 | 2 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV08G09060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G09060 | 1 | ||
| Tree-based ortholog | many-to-1 | VV08G09060 | 1 | ||
| Zea mays | Anchor point | 1-to-1 | ZM04G26760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM09G01820 | 1 | ||
| Tree-based ortholog | many-to-many | ZM09G01820 ZM05G42140 ZM04G26760 | 3 |