Integrative Orthology Viewer: SL10G079460 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL04G040220 SL10G079460 SL10G079750 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | SL10G079750 SL10G079460 | 2 | ||
Tree-based ortholog | SL10G079750 SL10G079460 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G41370 | 1 | |
Anchor point | N/A | AT2G41370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G41370 | 1 | ||
Tree-based ortholog | many-to-1 | AT2G41370 | 1 | ||
Brachypodium distachyon | Orthologous gene family | many-to-1 | BD2G60710 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G60710 | 1 | ||
Tree-based ortholog | many-to-many | BD2G60710 BD4G43150 | 2 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00005G01870 | 1 | |
Hordeum vulgare | Orthologous gene family | many-to-1 | HV40984G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV40984G00010 | 1 | ||
Tree-based ortholog | many-to-many | HV40984G00010 HV45509G00010 | 2 | ||
Musa acuminata | Orthologous gene family | many-to-many | MA00G11330 MA00G13810 MA05G08370 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA05G16710 | 1 | ||
Tree-based ortholog | many-to-many | MA05G16710 MA11G20860 MA05G08370 ... | 6 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G68420 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_01G68360 OSINDICA_11G03020 OSINDICA_08G16720 | 3 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G72020 | 1 | |
Tree-based ortholog | many-to-1 | OS01G72020 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00036G01690 PP00028G01130 PP00392G00170 | 3 | |
Tree-based ortholog | many-to-1 | PP00036G01690 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT06G04340 | 1 | |
Anchor point | N/A | PT06G04340 PT16G04050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT16G04050 PT06G04340 | 2 | ||
Tree-based ortholog | many-to-1 | PT06G04340 | 1 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G46280 | 1 | |
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB08G001180 | 1 | |
Tree-based ortholog | many-to-many | SB08G001180 SB05G002500 | 2 | ||
Vitis vinifera | Anchor point | N/A | VV08G09800 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G09800 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G27890 | 1 | |
Tree-based ortholog | many-to-many | ZM03G21000 ZM10G00310 | 2 |