Integrative Orthology Viewer: SL10G078720 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL10G078720 SL10G080460 | 2 | |
Anchor point | SL10G080460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | SL10G078720 SL10G080460 | 2 | ||
Tree-based ortholog | SL10G080460 SL10G078720 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G06800 | 1 | |
Anchor point | 1-to-1 | AT5G06800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G06800 | 1 | ||
Tree-based ortholog | many-to-1 | AT5G06800 | 1 | ||
Brachypodium distachyon | Anchor point | 1-to-1 | BD3G05500 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD5G25320 | 1 | ||
Tree-based ortholog | many-to-1 | BD5G25320 | 1 | ||
Carica papaya | Anchor point | 1-to-1 | CP00085G00820 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00033G01630 | 1 | ||
Tree-based ortholog | many-to-1 | CP00085G00820 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G01210 | 1 | |
Tree-based ortholog | many-to-1 | CR12G01210 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV37410G00020 | 1 | |
Tree-based ortholog | many-to-1 | HV37410G00020 | 1 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA04G19840 MA07G06550 | 2 | |
Tree-based ortholog | many-to-many | MA07G06550 MA04G19840 | 2 | ||
Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_06G41360 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_04G49120 | 1 | ||
Tree-based ortholog | many-to-1 | OSINDICA_04G49120 | 1 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS02G07770 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G56990 | 1 | ||
Tree-based ortholog | many-to-1 | OS04G56990 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL12G02830 | 1 | |
Tree-based ortholog | many-to-1 | OL12G02830 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00269G00210 PP00068G01350 PP00226G00160 | 3 | |
Tree-based ortholog | many-to-many | PP00083G00510 PP00024G00740 PP00073G00500 ... | 19 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT06G19100 PT16G04790 | 2 | |
Anchor point | 1-to-1 | PT16G04790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT16G04790 PT06G19100 | 2 | ||
Tree-based ortholog | many-to-many | PT06G19100 PT16G04790 | 2 | ||
Setaria italica | Anchor point | 1-to-1 | SI001G07240 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI003G02950 | 1 | ||
Tree-based ortholog | many-to-1 | SI003G02950 | 1 | ||
Sorghum bicolor | Anchor point | 1-to-many | SB04G008670 SB04G004930 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB06G031970 | 1 | ||
Tree-based ortholog | many-to-1 | SB06G031970 | 1 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G09340 | 1 | |
Tree-based ortholog | many-to-1 | VV08G09340 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM10G25840 | 1 | |
Tree-based ortholog | many-to-many | ZM02G01300 ZM10G25840 | 2 |