Integrative Orthology Viewer: SL10G076690 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL10G076690 | 1 | |
Anchor point | SL10G085180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | SL10G076690 SL10G085180 SL09G005360 | 3 | ||
Tree-based ortholog | SL09G005360 SL10G085180 SL10G076690 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-many | AT3G11200 AT5G05610 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G05610 | 1 | ||
Tree-based ortholog | many-to-many | AT3G11200 AT5G05610 | 2 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD1G03900 | 1 | |
Tree-based ortholog | many-to-1 | BD2G34640 | 1 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00019G01640 | 1 | |
Tree-based ortholog | many-to-1 | CP00019G01640 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR10G05060 | 1 | |
Tree-based ortholog | many-to-1 | CR10G05060 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV64516G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV6179G00010 | 1 | ||
Musa acuminata | Anchor point | 1-to-many | MA10G23530 MA02G19410 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA07G15940 MA02G19410 MA10G23530 | 3 | ||
Tree-based ortholog | many-to-many | MA07G15940 MA02G19410 MA10G23530 | 3 | ||
Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_01G06110 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_07G11360 | 1 | ||
Tree-based ortholog | many-to-1 | OSINDICA_05G05790 | 1 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS01G06540 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G12910 | 1 | ||
Tree-based ortholog | many-to-1 | OS05G07040 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL20G00420 | 1 | |
Tree-based ortholog | many-to-1 | OL20G00420 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00038G00610 PP00053G01210 PP00041G00790 ... | 7 | |
Tree-based ortholog | many-to-many | PP00117G00410 PP00053G01210 PP00041G00790 ... | 7 | ||
Populus trichocarpa | Anchor point | 1-to-many | PT10G18810 PT16G11690 PT08G06920 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT16G11690 PT06G10090 | 2 | ||
Tree-based ortholog | many-to-many | PT16G11690 PT06G10090 | 2 | ||
Setaria italica | Anchor point | 1-to-1 | SI005G11220 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI007G27980 | 1 | ||
Tree-based ortholog | many-to-1 | SI007G27980 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB01G003420 | 1 | |
Tree-based ortholog | many-to-many | SB03G005320 SB09G004740 | 2 | ||
Vitis vinifera | Anchor point | 1-to-many | VV08G00320 VV13G10380 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G00320 | 1 | ||
Tree-based ortholog | many-to-1 | VV08G00320 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G57700 | 1 | |
Tree-based ortholog | many-to-many | ZM08G03790 ZM08G19830 ZM06G19070 | 3 |