Integrative Orthology Viewer: SL10G055470 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL01G110000 SL04G080840 SL10G055470 ... | 6 | |
Anchor point | SL01G111540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | SL10G055470 SL01G111540 | 2 | ||
Tree-based ortholog | SL10G055470 SL01G111540 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G45130 AT2G28470 AT2G32810 ... | 9 | |
Anchor point | 1-to-many | AT4G35010 AT4G38590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT2G16730 AT4G35010 | 2 | ||
Tree-based ortholog | many-to-many | AT4G38590 AT3G53065 AT2G16730 ... | 4 | ||
Brachypodium distachyon | Orthologous gene family | many-to-many | BD1G74050 BD2G24670 BD2G40450 ... | 8 | |
Anchor point | 1-to-1 | BD1G67760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G42330 | 1 | ||
Tree-based ortholog | many-to-many | BD4G36517 BD3G42330 | 2 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00024G00230 CP00025G00590 CP00028G00010 ... | 6 | |
Anchor point | 1-to-1 | CP00037G01380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00037G01380 | 1 | ||
Tree-based ortholog | many-to-1 | CP00037G01380 | 1 | ||
Hordeum vulgare | Orthologous gene family | many-to-many | HV244240G00010 HV2547454G00010 HV368851G00010 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV59957G00010 | 1 | ||
Tree-based ortholog | many-to-1 | HV59957G00010 | 1 | ||
Musa acuminata | Orthologous gene family | many-to-many | MA01G27550 MA02G17150 MA02G22370 ... | 12 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA01G27550 MA00G12950 MA01G15390 ... | 4 | ||
Tree-based ortholog | many-to-many | MA00G12950 MA01G27550 MA01G15390 | 3 | ||
Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OSINDICA_01G62100 OSINDICA_02G11790 OSINDICA_06G38170 ... | 5 | |
Anchor point | 1-to-1 | OSINDICA_03G13370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_09G29090 | 1 | ||
Tree-based ortholog | many-to-many | OSINDICA_09G29090 OSINDICA_08G42260 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G39830 OS02G12730 OS03G06940 ... | 9 | |
Anchor point | 1-to-1 | OS03G15020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G43570 | 1 | ||
Tree-based ortholog | many-to-many | OS09G36810 OS08G43570 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00010G00770 PP00189G00400 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00010G00770 PP00189G00400 | 2 | ||
Tree-based ortholog | many-to-many | PP00010G00770 PP00189G00400 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G04060 PT01G02570 PT01G02580 ... | 9 | |
Anchor point | 1-to-many | PT04G17480 PT09G13440 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT04G17480 PT09G13440 | 2 | ||
Tree-based ortholog | many-to-many | PT09G13440 PT04G17480 | 2 | ||
Setaria italica | Orthologous gene family | many-to-many | SI001G03510 SI003G31090 SI004G24120 ... | 8 | |
Anchor point | 1-to-1 | SI009G48000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI006G24140 | 1 | ||
Tree-based ortholog | many-to-many | SI002G29680 SI006G24140 | 2 | ||
Sorghum bicolor | Orthologous gene family | many-to-many | SB01G040750 SB02G031260 SB03G025990 ... | 6 | |
Anchor point | 1-to-1 | SB01G040750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB07G024870 | 1 | ||
Tree-based ortholog | many-to-many | SB02G031260 SB07G024870 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV04G01310 VV06G05220 VV11G02200 ... | 5 | |
Anchor point | 1-to-1 | VV03G04780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV03G04780 | 1 | ||
Tree-based ortholog | many-to-1 | VV03G04780 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G36930 ZM02G34330 ZM03G25370 ... | 7 | |
Anchor point | 1-to-1 | ZM01G10060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G35110 | 1 | ||
Tree-based ortholog | many-to-many | ZM02G34330 ZM07G31220 ZM01G36930 ... | 4 |