Integrative Orthology Viewer: SL10G055450 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL10G055450 | 1 | |
Anchor point | SL01G111530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | SL01G111530 SL10G055450 | 2 | ||
Tree-based ortholog | SL01G111530 SL10G055450 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-1 | AT4G38600 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G38600 | 1 | ||
Tree-based ortholog | many-to-1 | AT4G38600 | 1 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD5G04567 | 1 | |
Tree-based ortholog | many-to-many | BD5G04567 BD3G00350 | 2 | ||
Carica papaya | Anchor point | 1-to-1 | CP00037G01390 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00037G01390 | 1 | ||
Tree-based ortholog | many-to-1 | CP00037G01390 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR07G00200 | 1 | |
Tree-based ortholog | many-to-1 | CR07G00200 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1558083G00010 | 1 | |
Tree-based ortholog | many-to-many | HV1558083G00010 HV6673G00010 | 2 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA01G02650 | 1 | |
Tree-based ortholog | many-to-many | MA08G13430 MA01G02650 | 2 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_02G00170 | 1 | |
Tree-based ortholog | many-to-1 | OSINDICA_02G00170 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G01170 | 1 | |
Tree-based ortholog | many-to-1 | OS05G03100 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL12G01100 | 1 | |
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00263G00010 | 1 | |
Tree-based ortholog | many-to-1 | PP00116G00550 | 1 | ||
Populus trichocarpa | Anchor point | 1-to-many | PT09G13430 PT04G17470 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT09G13430 PT04G17470 | 2 | ||
Tree-based ortholog | many-to-many | PT04G17470 PT09G13430 | 2 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI007G03130 | 1 | |
Tree-based ortholog | many-to-many | SI007G03130 SI001G00160 | 2 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB06G003290 | 1 | |
Tree-based ortholog | many-to-many | SB06G003290 SB04G000340 | 2 | ||
Vitis vinifera | Anchor point | 1-to-1 | VV03G04800 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV03G04800 VV04G00340 | 2 | ||
Tree-based ortholog | many-to-1 | VV03G04800 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G18930 | 1 | |
Tree-based ortholog | many-to-many | ZM02G18930 ZM04G41800 ZM05G16780 | 3 |