Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL10G008980
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL10G008980 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | SL10G008980 | 1 | ||
| Tree-based ortholog | SL10G008980 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | N/A | AT5G46110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G46110 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT5G46110 | 1 | ||
| Brachypodium distachyon | Orthologous gene family | 1-to-many | BD2G08340 BD2G31660 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G08340 | 1 | ||
| Tree-based ortholog | 1-to-many | BD2G31660 BD2G08340 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00027G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00027G00010 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR01G09880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G09880 | 1 | ||
| Tree-based ortholog | 1-to-1 | CR01G09880 | 1 | ||
| Hordeum vulgare | Orthologous gene family | 1-to-1 | HV6528G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV6528G00010 | 1 | ||
| Tree-based ortholog | 1-to-many | HV1573471G00010 HV6528G00010 | 2 | ||
| Musa acuminata | Orthologous gene family | 1-to-1 | MA10G15490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA10G15490 MA03G03240 | 2 | ||
| Tree-based ortholog | 1-to-many | MA10G15490 MA03G03240 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_05G15060 | 1 | |
| Tree-based ortholog | 1-to-many | OSINDICA_05G15060 OSINDICA_01G13110 OSINDICA_01G13130 | 3 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS01G13770 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G13770 | 1 | ||
| Tree-based ortholog | 1-to-many | OS05G15160 OS01G13770 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL14G02550 | 1 | |
| Tree-based ortholog | 1-to-1 | OL14G02550 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00450G00170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00450G00170 PP00450G00140 | 2 | ||
| Tree-based ortholog | 1-to-many | PP00450G00140 PP00450G00170 | 2 | ||
| Populus trichocarpa | Anchor point | N/A | PT04G04890 PT11G05780 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT11G05780 PT04G04890 | 2 | ||
| Tree-based ortholog | 1-to-many | PT04G04890 PT11G05780 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI005G00300 | 1 | |
| Tree-based ortholog | 1-to-many | SI003G08440 SI005G00300 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB03G000370 | 1 | |
| Tree-based ortholog | 1-to-many | SB09G008130 SB03G000370 | 2 | ||
| Vitis vinifera | Anchor point | N/A | VV10G01420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G01420 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV10G01420 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G06600 | 1 | |
| Tree-based ortholog | 1-to-many | ZM08G14090 ZM08G06600 | 2 |