Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL09G061710
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL09G061710 | 1 |  |
| Anchor point | SL09G091590 SL06G083540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | SL09G061710 | 1 | ||
| Tree-based ortholog | SL06G083540 SL09G061710 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G07030 | 1 | |
| Tree-based ortholog | many-to-1 | AT3G07030 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G73960 | 1 | |
| Tree-based ortholog | many-to-1 | BD1G09507 | 1 | ||
| Carica papaya | Anchor point | many-to-1 | CP00008G01650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00049G00980 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00049G00980 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G10190 | 1 | |
| Tree-based ortholog | many-to-1 | CR09G10190 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV40813G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV40813G00010 | 1 | ||
| Musa acuminata | Orthologous gene family | 1-to-many | MA00G00230 MA08G32620 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA08G32620 MA00G00230 | 2 | ||
| Tree-based ortholog | many-to-many | MA00G00230 MA08G32620 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G50650 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_04G27190 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G06980 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G06980 | 1 | ||
| Tree-based ortholog | many-to-many | OS03G06980 OS03G52490 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00010G00800 PP00094G00080 PP00018G00130 | 3 | |
| Tree-based ortholog | many-to-many | PP00018G00130 PP00010G00800 | 2 | ||
| Populus trichocarpa | Anchor point | many-to-1 | PT02G24060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G24060 | 1 | ||
| Tree-based ortholog | many-to-many | PT02G06610 PT02G01760 PT05G24430 | 3 | ||
| Setaria italica | Orthologous gene family | 1-to-1 | SI009G54470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G54470 | 1 | ||
| Tree-based ortholog | many-to-many | SI009G54470 SI009G10110 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G008920 | 1 | |
| Tree-based ortholog | many-to-1 | SB01G008920 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV07G12490 | 1 | |
| Anchor point | many-to-1 | VV07G12490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G12490 | 1 | ||
| Tree-based ortholog | many-to-1 | VV07G12490 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G04700 | 1 | |
| Tree-based ortholog | many-to-1 | ZM09G28890 | 1 |