Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL06G083800
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL06G083800 | 1 |  |
| Anchor point | SL06G008240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SL06G083800 SL06G008240 SL09G072640 | 3 | ||
| Tree-based ortholog | SL06G083800 SL06G008240 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-many | AT2G20430 AT1G03982 AT3G23380 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT2G20430 AT4G28556 | 2 | ||
| Tree-based ortholog | many-to-many | AT1G03982 AT2G20430 AT4G28556 | 3 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD3G54830 | 1 | |
| Tree-based ortholog | many-to-1 | BD3G54830 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00165G00290 | 1 | |
| Tree-based ortholog | many-to-1 | CP00165G00290 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV137374G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV229787G00010 HV138439G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA00G17220 MA11G16950 | 2 | |
| Tree-based ortholog | many-to-1 | MA01G05860 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_07G20040 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_02G54750 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS07G26480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G26480 | 1 | ||
| Tree-based ortholog | many-to-1 | OS02G56580 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00046G00340 | 1 | |
| Tree-based ortholog | many-to-1 | PP00046G00340 | 1 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT02G03550 PT08G16890 PT05G22750 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT02G03550 PT05G22750 | 2 | ||
| Tree-based ortholog | many-to-many | PT02G03550 PT05G22750 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI001G08110 | 1 | |
| Tree-based ortholog | many-to-many | SI001G08110 SI004G26710 SI007G25450 ... | 4 | ||
| Sorghum bicolor | Orthologous gene family | 1-to-1 | SB02G010600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB07G005150 | 1 | ||
| Tree-based ortholog | many-to-1 | SB04G036650 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-1 | VV05G08490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV05G08490 | 1 | ||
| Tree-based ortholog | many-to-1 | VV10G00400 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM02G28150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G43740 | 1 | ||
| Tree-based ortholog | many-to-many | ZM05G43740 ZM04G25400 | 2 |