Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL06G005840
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL06G005840 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | SL06G005840 | 1 | ||
| Tree-based ortholog | SL09G011760 SL06G005840 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | N/A | AT2G29530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G29530 | 1 | ||
| Tree-based ortholog | many-to-1 | AT2G29530 | 1 | ||
| Brachypodium distachyon | Anchor point | N/A | BD1G03410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G03410 | 1 | ||
| Tree-based ortholog | many-to-1 | BD1G03410 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G06900 | 1 | |
| Tree-based ortholog | many-to-1 | CR12G06900 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV158775G00020 | 1 | |
| Tree-based ortholog | many-to-1 | HV158775G00020 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA10G14260 | 1 | |
| Tree-based ortholog | many-to-many | MA06G15280 MA10G14260 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_07G12230 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_07G12230 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | N/A | OS03G61019 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G61019 | 1 | ||
| Tree-based ortholog | many-to-many | OS07G13950 OS03G61019 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G00970 | 1 | |
| Tree-based ortholog | many-to-1 | OL03G00970 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00028G00900 | 1 | |
| Tree-based ortholog | many-to-1 | PP00028G00900 | 1 | ||
| Populus trichocarpa | Anchor point | N/A | PT01G24650 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G24650 PT09G03960 | 2 | ||
| Tree-based ortholog | many-to-many | PT01G24650 PT09G03960 | 2 | ||
| Setaria italica | Anchor point | N/A | SI009G02830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI002G09270 | 1 | ||
| Tree-based ortholog | many-to-many | SI002G09270 SI009G02830 | 2 | ||
| Sorghum bicolor | Anchor point | N/A | SB01G002840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G002840 | 1 | ||
| Tree-based ortholog | many-to-many | SB02G007270 SB01G002840 | 2 | ||
| Vitis vinifera | Anchor point | N/A | VV06G02530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G02530 | 1 | ||
| Tree-based ortholog | many-to-1 | VV06G02530 | 1 | ||
| Zea mays | Anchor point | N/A | ZM01G58300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G58300 | 1 | ||
| Tree-based ortholog | many-to-many | ZM05G01250 ZM01G58300 | 2 |