Integrative Orthology Viewer: SL05G012000 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL05G012000 | 1 | |
Anchor point | SL03G114820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | SL05G012000 | 1 | ||
Tree-based ortholog | SL05G012000 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | 1-to-many | AT2G03720 AT1G69080 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G03720 | 1 | ||
Tree-based ortholog | 1-to-many | AT5G17390 AT3G03290 | 2 | ||
Brachypodium distachyon | Anchor point | 1-to-1 | BD1G15100 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD4G06900 | 1 | ||
Tree-based ortholog | 1-to-many | BD4G06900 BD1G15100 | 2 | ||
Carica papaya | Anchor point | 1-to-1 | CP00001G01590 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00001G01590 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00003G02490 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV1573279G00010 | 1 | |
Tree-based ortholog | 1-to-1 | HV38507G00010 | 1 | ||
Musa acuminata | Anchor point | 1-to-1 | MA04G24200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA03G16240 MA08G04420 MA03G25920 ... | 4 | ||
Tree-based ortholog | 1-to-many | MA03G16240 MA03G25920 MA08G04420 ... | 5 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G38210 | 1 | |
Tree-based ortholog | 1-to-many | OSINDICA_12G21210 OSINDICA_03G38210 | 2 | ||
Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS03G40130 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G31710 | 1 | ||
Tree-based ortholog | 1-to-many | OS12G31710 OS03G40130 | 2 | ||
Populus trichocarpa | Anchor point | 1-to-many | PT15G06070 PT10G14020 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G14020 PT08G10900 | 2 | ||
Tree-based ortholog | 1-to-many | PT08G10900 PT10G14020 | 2 | ||
Setaria italica | Anchor point | 1-to-1 | SI003G36750 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI003G36750 | 1 | ||
Tree-based ortholog | 1-to-1 | SI003G36750 | 1 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB08G015550 | 1 | |
Tree-based ortholog | 1-to-many | SB08G015550 SB01G015140 | 2 | ||
Vitis vinifera | Anchor point | 1-to-many | VV01G10780 VV17G04860 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G10780 | 1 | ||
Tree-based ortholog | 1-to-1 | VV17G04860 | 1 | ||
Zea mays | Anchor point | 1-to-1 | ZM01G46010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G04160 | 1 | ||
Tree-based ortholog | 1-to-many | ZM10G04160 ZM01G46010 | 2 |