Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL03G118740
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL03G118740 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | SL03G118740 | 1 | ||
| Tree-based ortholog | SL10G080880 SL10G078370 SL03G118740 | 3 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | N/A | AT1G73590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G73590 | 1 | ||
| Tree-based ortholog | many-to-1 | AT1G73590 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G45020 | 1 | |
| Tree-based ortholog | many-to-many | BD1G45020 BD3G59520 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00092G00840 | 1 | |
| Tree-based ortholog | many-to-1 | CP00092G00840 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV49437G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV1563877G00010 HV49437G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA07G07500 MA03G07390 | 2 | |
| Tree-based ortholog | many-to-many | MA08G23720 MA03G07390 MA09G15910 ... | 5 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_06G12110 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_06G12110 OSINDICA_02G49260 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G50960 | 1 | |
| Tree-based ortholog | many-to-many | OS06G12610 OS02G50960 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00032G00210 PP00018G00940 PP00010G00090 | 3 | |
| Tree-based ortholog | many-to-many | PP00018G00940 PP00010G00090 PP00032G00210 | 3 | ||
| Populus trichocarpa | Anchor point | N/A | PT15G03870 PT12G04720 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G03870 PT12G04720 | 2 | ||
| Tree-based ortholog | many-to-many | PT06G03700 PT16G03530 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI004G10180 | 1 | |
| Tree-based ortholog | many-to-many | SI004G10180 SI001G33000 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB10G008290 | 1 | |
| Tree-based ortholog | many-to-1 | SB10G008290 | 1 | ||
| Vitis vinifera | Anchor point | N/A | VV17G07150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV08G03410 VV08G03400 | 2 | ||
| Tree-based ortholog | many-to-many | VV08G03410 VV08G03400 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G00670 | 1 | |
| Tree-based ortholog | many-to-many | ZM09G00670 ZM04G27920 ZM05G40150 | 3 |