Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL03G112140
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL03G112140 | 1 |  |
| Anchor point | SL06G071800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SL03G112140 SL06G071800 | 2 | ||
| Tree-based ortholog | SL03G112140 SL06G071800 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT3G22420 AT5G28080 | 2 | |
| Anchor point | 1-to-1 | AT3G48260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G48260 | 1 | ||
| Tree-based ortholog | many-to-1 | AT3G48260 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G39347 | 1 | |
| Tree-based ortholog | many-to-1 | BD2G39347 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00159G00120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00159G00120 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00159G00120 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR01G08700 CR01G08690 | 2 | |
| Tree-based ortholog | many-to-many | CR06G13920 CR14G03650 CR01G08700 ... | 5 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV2547009G00010 | 1 | |
| Tree-based ortholog | many-to-1 | HV2547009G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA06G12420 MA10G17170 | 2 | |
| Tree-based ortholog | many-to-many | MA10G17170 MA06G12420 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_05G00730 | 1 | |
| Tree-based ortholog | many-to-1 | OSINDICA_05G00730 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G01780 | 1 | |
| Tree-based ortholog | many-to-1 | OS05G01780 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL08G00140 | 1 | |
| Tree-based ortholog | many-to-1 | OL08G00140 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00384G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00384G00020 | 1 | ||
| Tree-based ortholog | many-to-many | PP00384G00020 PP00237G00010 | 2 | ||
| Populus trichocarpa | Anchor point | 1-to-1 | PT12G08670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT12G08670 PT15G08460 | 2 | ||
| Tree-based ortholog | many-to-many | PT12G08670 PT15G08460 | 2 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI003G06800 | 1 | |
| Tree-based ortholog | many-to-1 | SI003G06800 | 1 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB09G000920 | 1 | |
| Tree-based ortholog | many-to-1 | SB09G000920 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV04G05450 | 1 | |
| Anchor point | 1-to-1 | VV17G00870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV17G00870 | 1 | ||
| Tree-based ortholog | many-to-1 | VV17G00870 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G05310 | 1 | |
| Tree-based ortholog | many-to-1 | ZM06G05310 | 1 |