Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL02G089680
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL02G065600 SL02G089680 SL02G089690 ... | 4 |  |
| Best-Hits-and-Inparalogs(BHI)family | SL02G065600 SL02G089680 SL02G089690 ... | 4 | ||
| Tree-based ortholog | SL02G089690 SL02G089680 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G15900 | 1 | |
| Tree-based ortholog | many-to-many | AT5G15900 AT3G02440 AT5G15890 | 3 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G45350 | 1 | |
| Tree-based ortholog | many-to-many | BD2G45350 BD2G45360 BD1G43730 ... | 7 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00179G00460 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00179G00460 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00179G00460 | 1 | ||
| Hordeum vulgare | Orthologous gene family | many-to-1 | HV135569G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV135569G00020 | 1 | ||
| Tree-based ortholog | many-to-many | HV135569G00020 HV43034G00010 HV54610G00010 ... | 8 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA07G20520 | 1 | |
| Tree-based ortholog | many-to-many | MA04G04120 MA04G06340 | 2 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G43930 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_01G43930 OSINDICA_01G43940 OSINDICA_06G15190 ... | 11 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G46400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G46400 | 1 | ||
| Tree-based ortholog | many-to-many | OS01G46400 OS01G46410 OS06G16170 ... | 11 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00326G00130 PP00002G00270 PP00154G00820 ... | 7 | |
| Tree-based ortholog | many-to-many | PP00023G00570 PP00154G00820 PP00106G00770 ... | 7 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT04G10570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT04G10570 | 1 | ||
| Tree-based ortholog | many-to-1 | PT04G10570 | 1 | ||
| Setaria italica | Orthologous gene family | many-to-1 | SI005G25370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G25370 | 1 | ||
| Tree-based ortholog | many-to-many | SI005G25370 SI005G25390 SI004G12200 ... | 10 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G029740 | 1 | |
| Tree-based ortholog | many-to-many | SB03G029740 SB03G029760 SB10G009930 ... | 7 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV14G15510 VV14G15500 | 2 | |
| Tree-based ortholog | many-to-1 | VV14G15510 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G36140 | 1 | |
| Tree-based ortholog | many-to-many | ZM03G36140 ZM03G36120 ZM09G07540 ... | 6 |