Integrative Orthology Viewer: SL02G084860 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL02G084860 | 1 | |
Anchor point | SL04G080740 SL03G033730 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | SL02G084860 | 1 | ||
Tree-based ortholog | SL04G080740 SL01G109880 SL10G054010 ... | 4 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-1 | AT2G18160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G34590 | 1 | ||
Tree-based ortholog | many-to-many | AT1G75390 AT4G34590 | 2 | ||
Brachypodium distachyon | Anchor point | many-to-1 | BD3G05577 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G02980 | 1 | ||
Tree-based ortholog | many-to-many | BD4G27720 BD3G22040 | 2 | ||
Carica papaya | Anchor point | many-to-1 | CP00006G01700 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00538G00010 | 1 | ||
Tree-based ortholog | many-to-many | CP00006G01700 CP00538G00010 | 2 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR10G04610 | 1 | |
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV47588G00010 | 1 | |
Tree-based ortholog | many-to-1 | HV59155G00010 | 1 | ||
Musa acuminata | Anchor point | many-to-1 | MA10G21170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA04G06580 MA03G29540 MA03G29450 | 3 | ||
Tree-based ortholog | many-to-1 | MA10G21170 | 1 | ||
Oryza sativa ssp. indica | Anchor point | many-to-1 | OSINDICA_02G07600 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_02G03300 | 1 | ||
Tree-based ortholog | many-to-1 | OSINDICA_00G33880 | 1 | ||
Oryza sativa ssp. japonica | Anchor point | many-to-many | OS02G07840 OS06G45140 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G03960 | 1 | ||
Tree-based ortholog | many-to-many | OS09G13575 OS09G13570 OS08G26880 | 3 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00069G00660 PP00158G00490 | 2 | |
Tree-based ortholog | many-to-1 | PP00158G00490 | 1 | ||
Populus trichocarpa | Anchor point | many-to-many | PT09G11970 PT02G03190 PT04G15820 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G15820 PT09G11970 | 2 | ||
Tree-based ortholog | many-to-many | PT05G11930 PT07G01990 PT05G23130 ... | 6 | ||
Setaria italica | Anchor point | many-to-1 | SI001G07150 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI003G34430 | 1 | ||
Tree-based ortholog | many-to-many | SI002G17220 SI006G12440 | 2 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB04G002700 | 1 | |
Tree-based ortholog | many-to-many | SB02G020760 SB07G015450 | 2 | ||
Vitis vinifera | Anchor point | many-to-1 | VV03G02860 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G02860 | 1 | ||
Tree-based ortholog | many-to-1 | VV03G02860 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G18680 ZM04G40980 | 2 | |
Tree-based ortholog | many-to-1 | ZM07G10870 | 1 |