Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL02G077560
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL02G077560 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | SL02G077560 | 1 | ||
| Tree-based ortholog | SL02G077560 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G33860 | 1 | |
| Tree-based ortholog | 1-to-1 | AT2G33860 | 1 | ||
| Brachypodium distachyon | Anchor point | N/A | BD2G50120 BD2G46190 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G46190 | 1 | ||
| Tree-based ortholog | 1-to-many | BD2G50120 BD2G19867 BD2G16610 ... | 4 | ||
| Carica papaya | Anchor point | N/A | CP00007G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00007G00030 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00007G00030 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV169841G00010 | 1 | |
| Tree-based ortholog | 1-to-many | HV51557G00010 HV2549990G00010 HV1577796G00010 ... | 4 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA04G10900 MA03G32160 MA07G25940 ... | 4 | |
| Tree-based ortholog | 1-to-many | MA04G10900 MA04G02840 MA07G25940 ... | 6 | ||
| Oryza sativa ssp. indica | Anchor point | N/A | OSINDICA_05G42970 OSINDICA_01G45460 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_01G45460 | 1 | ||
| Tree-based ortholog | 1-to-many | OSINDICA_01G51910 OSINDICA_05G42970 OSINDICA_01G45460 | 3 | ||
| Oryza sativa ssp. japonica | Anchor point | N/A | OS01G54990 OS01G48060 OS05G48870 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G48060 | 1 | ||
| Tree-based ortholog | 1-to-many | OS01G54990 OS05G43920 OS05G48870 ... | 4 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00014G02180 PP00280G00020 PP00341G00020 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00280G00020 PP00341G00020 PP00014G02180 ... | 4 | ||
| Populus trichocarpa | Anchor point | N/A | PT11G05910 PT04G05020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G05020 PT11G05930 | 2 | ||
| Tree-based ortholog | 1-to-many | PT11G05910 PT11G05930 PT04G05020 | 3 | ||
| Setaria italica | Anchor point | N/A | SI005G32830 SI005G27210 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI005G32830 | 1 | ||
| Tree-based ortholog | 1-to-many | SI005G32830 SI003G18250 SI003G14710 ... | 4 | ||
| Sorghum bicolor | Anchor point | N/A | SB03G030740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB09G028450 | 1 | ||
| Tree-based ortholog | 1-to-many | SB09G025500 SB09G028450 SB03G030740 | 3 | ||
| Vitis vinifera | Anchor point | N/A | VV10G01530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G01530 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV10G01530 | 1 | ||
| Zea mays | Anchor point | N/A | ZM06G31100 ZM03G35310 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G31100 | 1 | ||
| Tree-based ortholog | 1-to-many | ZM03G31620 ZM08G34820 ZM06G28480 ... | 5 |