Integrative Orthology Viewer: SL02G077450 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Tree-based ortholog | SL02G077450 SL10G008880 | 2 | |
Orthologous gene family | SL02G077450 | 1 | ||
Anchor point | SL10G008880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | SL10G008880 SL02G077450 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT1G28520 | 1 | |
Anchor point | 1-to-1 | AT1G28520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G28520 | 1 | ||
Brachypodium distachyon | Tree-based ortholog | many-to-many | BD2G50070 BD2G19820 | 2 | |
Orthologous gene family | 1-to-many | BD2G19820 BD2G50070 | 2 | ||
Anchor point | 1-to-1 | BD2G50070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G19820 | 1 | ||
Carica papaya | Tree-based ortholog | many-to-1 | CP00007G00070 | 1 | |
Orthologous gene family | 1-to-1 | CP00007G00070 | 1 | ||
Anchor point | 1-to-1 | CP00007G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00007G00070 | 1 | ||
Hordeum vulgare | Tree-based ortholog | many-to-many | HV68202G00010 HV1561237G00010 | 2 | |
Orthologous gene family | 1-to-1 | HV1561237G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV68202G00010 | 1 | ||
Musa acuminata | Tree-based ortholog | many-to-many | MA01G28470 MA06G22850 MA04G15500 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA10G26650 MA07G11250 | 2 | ||
Oryza sativa ssp. indica | Tree-based ortholog | many-to-many | OSINDICA_01G51810 OSINDICA_05G39210 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G51810 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS01G54930 OS05G43950 | 2 | |
Anchor point | 1-to-1 | OS01G54930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G54930 | 1 | ||
Physcomitrella patens | Tree-based ortholog | many-to-many | PP00113G00190 PP00218G00300 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00218G00300 PP00113G00190 | 2 | ||
Populus trichocarpa | Tree-based ortholog | many-to-many | PT11G06000 PT04G05090 | 2 | |
Anchor point | 1-to-many | PT11G06000 PT19G09280 PT04G05090 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT04G05090 PT11G06000 | 2 | ||
Setaria italica | Tree-based ortholog | many-to-many | SI005G32780 SI003G18180 | 2 | |
Orthologous gene family | 1-to-1 | SI005G32780 | 1 | ||
Anchor point | 1-to-1 | SI005G32780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G32780 | 1 | ||
Sorghum bicolor | Tree-based ortholog | many-to-many | SB03G034810 SB09G025580 | 2 | |
Orthologous gene family | 1-to-many | SB03G034810 SB09G025580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G034810 | 1 | ||
Vitis vinifera | Tree-based ortholog | many-to-1 | VV10G01590 | 1 | |
Anchor point | 1-to-many | VV12G02360 VV10G01590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV10G01590 | 1 | ||
Zea mays | Tree-based ortholog | many-to-many | ZM08G34840 ZM03G32140 ZM03G14300 ... | 6 | |
Orthologous gene family | 1-to-many | ZM02G40520 ZM03G14300 ZM03G32140 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM08G34840 | 1 |