Integrative Orthology Viewer: SL01G088160 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL01G088160 SL04G016430 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | SL01G088160 | 1 | ||
Tree-based ortholog | SL01G088160 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | N/A | AT3G63440 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G63440 | 1 | ||
Tree-based ortholog | 1-to-1 | AT3G63440 | 1 | ||
Brachypodium distachyon | Orthologous gene family | many-to-many | BD2G27170 BD2G51530 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G60456 | 1 | ||
Tree-based ortholog | 1-to-many | BD2G27170 BD2G60456 | 2 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00099G00130 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP02087G00010 | 1 | ||
Tree-based ortholog | 1-to-1 | CP02087G00010 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV1560205G00010 | 1 | |
Tree-based ortholog | 1-to-1 | HV1560205G00010 | 1 | ||
Musa acuminata | Orthologous gene family | many-to-1 | MA07G01680 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA03G08900 MA09G18210 | 2 | ||
Tree-based ortholog | 1-to-many | MA03G08900 MA09G18210 | 2 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_01G67710 | 1 | |
Tree-based ortholog | 1-to-many | OSINDICA_05G27400 OSINDICA_01G67710 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G71310 OS05G31040 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G71310 | 1 | ||
Tree-based ortholog | 1-to-many | OS05G31040 OS01G71310 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00222G00260 PP00212G00530 PP00595G00010 ... | 6 | |
Tree-based ortholog | 1-to-many | PP00403G00190 PP00212G00530 PP00222G00210 ... | 6 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G02090 PT03G20360 PT06G04790 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G02090 PT03G20360 | 2 | ||
Tree-based ortholog | 1-to-many | PT03G20360 PT01G02090 | 2 | ||
Setaria italica | Orthologous gene family | many-to-1 | SI005G45970 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI005G45970 | 1 | ||
Tree-based ortholog | 1-to-many | SI003G26790 SI005G45970 | 2 | ||
Sorghum bicolor | Orthologous gene family | many-to-many | SB03G045410 SB09G018640 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB03G045410 | 1 | ||
Tree-based ortholog | 1-to-many | SB09G018640 SB03G045410 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G11520 VV07G12680 | 2 | |
Anchor point | N/A | VV13G01170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G01170 | 1 | ||
Tree-based ortholog | 1-to-1 | VV13G01170 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G27990 | 1 | |
Tree-based ortholog | 1-to-many | ZM04G36680 ZM08G27990 ZM03G21330 | 3 |