Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SL01G066830
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL01G066830 | 1 |  |
| Anchor point | SL12G099530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SL01G066830 SL12G099530 | 2 | ||
| Tree-based ortholog | SL12G099530 SL01G066830 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | 1-to-many | AT3G06910 AT4G15880 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G15880 | 1 | ||
| Tree-based ortholog | many-to-many | AT4G00690 AT4G15880 | 2 | ||
| Brachypodium distachyon | Anchor point | 1-to-many | BD1G18100 BD1G62760 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G12720 | 1 | ||
| Tree-based ortholog | many-to-many | BD1G18100 BD1G62760 BD2G12720 | 3 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00016G01810 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00016G01810 | 1 | ||
| Tree-based ortholog | many-to-1 | CP00016G01810 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR16G00820 | 1 | |
| Tree-based ortholog | many-to-1 | CR16G00820 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV133117G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV56041G00030 HV133117G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA03G24660 MA08G06860 | 2 | |
| Tree-based ortholog | many-to-many | MA03G24660 MA08G06860 | 2 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_03G21520 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G24520 | 1 | ||
| Tree-based ortholog | many-to-many | OSINDICA_03G27930 OSINDICA_03G21520 OSINDICA_01G24520 | 3 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS03G22400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G25370 | 1 | ||
| Tree-based ortholog | many-to-many | OS03G29630 OS03G22400 OS01G25370 | 3 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL03G03170 | 1 | |
| Tree-based ortholog | many-to-1 | OL03G03170 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00210G00280 PP00244G00230 | 2 | |
| Tree-based ortholog | many-to-many | PP00210G00280 PP00244G00230 | 2 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT08G22150 PT10G01360 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT08G22610 PT08G22150 PT10G01360 | 3 | ||
| Tree-based ortholog | many-to-many | PT08G22150 PT08G22610 PT10G01360 | 3 | ||
| Setaria italica | Anchor point | 1-to-many | SI009G42020 SI002G43860 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI005G16390 | 1 | ||
| Tree-based ortholog | many-to-many | SI002G43860 SI009G42020 SI005G16390 | 3 | ||
| Sorghum bicolor | Anchor point | 1-to-1 | SB01G035640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G013930 | 1 | ||
| Tree-based ortholog | many-to-many | SB01G035640 SB03G013930 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV05G02860 | 1 | |
| Tree-based ortholog | many-to-1 | VV05G02860 | 1 | ||
| Zea mays | Anchor point | 1-to-many | ZM02G40800 ZM01G15130 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G12190 | 1 | ||
| Tree-based ortholog | many-to-many | ZM02G40800 ZM01G15130 ZM03G12190 ... | 4 |