Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI009G45260
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Orthologous gene family | SI009G45260 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | SI009G45260 | 1 | ||
| Tree-based ortholog | SI009G45260 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Anchor point | N/A | AT5G05550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT5G05550 AT3G11100 | 2 | ||
| Tree-based ortholog | 1-to-1 | AT3G24490 | 1 | ||
| Brachypodium distachyon | Orthologous gene family | 1-to-1 | BD1G65410 | 1 | |
| Anchor point | N/A | BD1G65410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G65410 | 1 | ||
| Tree-based ortholog | 1-to-1 | BD2G48320 | 1 | ||
| Carica papaya | Anchor point | N/A | CP00019G01510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G01510 | 1 | ||
| Tree-based ortholog | 1-to-many | CP00181G00090 CP00023G01010 | 2 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | HV274892G00010 HV1571352G00010 | 2 | |
| Tree-based ortholog | 1-to-1 | HV274892G00010 | 1 | ||
| Musa acuminata | Anchor point | N/A | MA09G04640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA01G28550 MA05G09370 MA01G11860 ... | 5 | ||
| Tree-based ortholog | 1-to-many | MA08G04120 MA08G26840 | 2 | ||
| Oryza sativa ssp. indica | Orthologous gene family | 1-to-1 | OSINDICA_03G17080 | 1 | |
| Anchor point | N/A | OSINDICA_03G17080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G17080 | 1 | ||
| Tree-based ortholog | 1-to-1 | OSINDICA_03G17080 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G18330 | 1 | |
| Anchor point | N/A | OS03G18330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G18330 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS03G18330 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00031G01530 PP00136G00620 PP00065G01130 | 3 | |
| Populus trichocarpa | Anchor point | N/A | PT08G07130 PT10G18620 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G07130 | 1 | ||
| Tree-based ortholog | 1-to-many | PT03G05600 PT01G17980 PT18G07550 | 3 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G051120 | 1 | |
| Tree-based ortholog | 1-to-many | SL12G043090 SL05G018350 | 2 | ||
| Sorghum bicolor | Anchor point | N/A | SB01G038330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G038330 | 1 | ||
| Tree-based ortholog | 1-to-1 | SB03G033020 | 1 | ||
| Vitis vinifera | Anchor point | N/A | VV13G10170 VV08G06810 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G10170 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV09G05300 | 1 | ||
| Zea mays | Anchor point | N/A | ZM01G12430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G12430 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM08G26680 | 1 |