Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI009G43700
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Tree-based ortholog | SI009G43700 | 1 |  |
| Orthologous gene family | SI009G43700 | 1 | ||
| Anchor point | SI005G36180 SI003G19790 SI002G44770 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | SI009G43700 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Tree-based ortholog | 1-to-many | AT5G06950 AT3G12250 AT5G06960 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT5G06950 AT3G12250 | 2 | ||
| Brachypodium distachyon | Tree-based ortholog | 1-to-1 | BD1G64060 | 1 | |
| Anchor point | many-to-many | BD1G64060 BD1G17210 BD2G21380 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G64060 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00005G01590 CP00847G00010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00005G01590 | 1 | ||
| Hordeum vulgare | Tree-based ortholog | 1-to-1 | HV48268G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV48268G00010 | 1 | ||
| Musa acuminata | Tree-based ortholog | 1-to-1 | MA00G12590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA08G22200 MA11G25880 MA10G00350 | 3 | ||
| Oryza sativa ssp. indica | Tree-based ortholog | 1-to-1 | OSINDICA_03G19340 | 1 | |
| Anchor point | many-to-many | OSINDICA_07G40760 OSINDICA_03G19340 OSINDICA_01G56220 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_01G56220 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS03G20310 | 1 | |
| Anchor point | many-to-many | OS07G48820 OS05G41280 OS03G20310 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G20310 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00258G00030 PP00126G01000 PP00030G01620 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00030G01620 PP00257G00610 PP00126G01000 ... | 4 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT16G03650 PT06G03900 PT10G12800 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G19460 PT01G02980 | 2 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL10G080780 SL10G080770 SL01G008730 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G080770 | 1 | ||
| Sorghum bicolor | Tree-based ortholog | 1-to-many | SB03G037560 SB09G024110 SB03G006790 | 3 | |
| Anchor point | many-to-many | SB03G037560 SB09G024110 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB03G037560 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV08G10290 VV13G12630 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G12630 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM09G22040 ZM01G13780 | 2 | |
| Anchor point | many-to-many | ZM08G18570 ZM01G13780 ZM09G22040 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G13780 | 1 |