Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI007G32070
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Tree-based ortholog | SI007G32070 SI008G02060 | 2 |  |
| Orthologous gene family | SI007G32070 | 1 | ||
| Anchor point | SI008G02060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SI008G02060 SI007G32070 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT5G16260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G16260 | 1 | ||
| Brachypodium distachyon | Tree-based ortholog | many-to-1 | BD5G14550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD5G14550 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00088G00040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00088G00040 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR17G02430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR17G02430 | 1 | ||
| Hordeum vulgare | Tree-based ortholog | many-to-1 | HV58866G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV58866G00010 | 1 | ||
| Musa acuminata | Tree-based ortholog | many-to-1 | MA08G29730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA08G29730 | 1 | ||
| Oryza sativa ssp. indica | Tree-based ortholog | many-to-1 | OSINDICA_04G33940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_04G33940 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-1 | OS04G41910 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G41910 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL02G00800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL02G00800 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-1 | PP00009G02290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00009G02290 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-many | PT08G07820 PT10G17900 | 2 | |
| Orthologous gene family | 1-to-1 | PT10G17900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT08G07820 PT10G17900 | 2 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-1 | SL11G008700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL11G008700 | 1 | ||
| Sorghum bicolor | Tree-based ortholog | many-to-many | SB05G002130 SB08G001370 | 2 | |
| Anchor point | 1-to-many | SB05G002130 SB08G001370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB08G001370 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-many | VV00G19750 VV00G08350 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV00G19750 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM07G21970 ZM01G54030 ZM05G26230 ... | 5 | |
| Anchor point | 1-to-many | ZM04G29240 ZM02G25100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM02G25100 | 1 |