Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI006G23980
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Tree-based ortholog | SI002G29420 SI006G23980 | 2 |  |
| Orthologous gene family | SI006G23980 | 1 | ||
| Anchor point | SI002G29420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SI006G23980 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Tree-based ortholog | many-to-many | AT4G38790 AT2G21190 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT4G38790 AT2G21190 | 2 | ||
| Brachypodium distachyon | Tree-based ortholog | many-to-1 | BD4G36280 | 1 | |
| Anchor point | 1-to-many | BD3G42420 BD4G36280 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G42420 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00037G01940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00026G00420 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR13G00170 | 1 | |
| Orthologous gene family | 1-to-1 | CR13G00170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G00170 | 1 | ||
| Hordeum vulgare | Tree-based ortholog | many-to-1 | HV1564161G00010 | 1 | |
| Orthologous gene family | 1-to-1 | HV1564161G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV1564161G00010 | 1 | ||
| Musa acuminata | Tree-based ortholog | many-to-many | MA01G16740 MA01G16750 MA01G17050 ... | 7 | |
| Orthologous gene family | 1-to-1 | MA00G07680 | 1 | ||
| Anchor point | 1-to-many | MA02G03490 MA01G07960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA01G07960 MA02G03490 MA00G07680 | 3 | ||
| Oryza sativa ssp. indica | Tree-based ortholog | many-to-1 | OSINDICA_08G42150 | 1 | |
| Orthologous gene family | 1-to-1 | OSINDICA_09G28660 | 1 | ||
| Anchor point | 1-to-many | OSINDICA_08G42150 OSINDICA_09G28660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_08G42150 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-1 | OS08G43470 | 1 | |
| Orthologous gene family | 1-to-1 | OS08G43470 | 1 | ||
| Anchor point | 1-to-many | OS08G43470 OS09G36370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G43470 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL05G00400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G00400 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00442G00110 PP00195G00300 PP00280G00260 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00442G00110 PP00280G00260 PP00195G00300 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-many | PT09G12890 PT04G16740 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G16740 PT09G12890 | 2 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-many | SL01G111090 SL10G054850 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G111090 | 1 | ||
| Sorghum bicolor | Tree-based ortholog | many-to-many | SB02G031010 SB07G024960 | 2 | |
| Anchor point | 1-to-many | SB07G024960 SB02G031010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB07G024960 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV18G10560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G10560 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM07G20500 ZM02G34160 ZM04G34990 ... | 4 | |
| Orthologous gene family | 1-to-many | ZM02G34160 ZM04G34990 ZM07G20500 | 3 | ||
| Anchor point | 1-to-many | ZM01G37030 ZM02G34160 ZM04G34990 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G37030 | 1 |