Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI005G37690
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Tree-based ortholog | SI005G37690 | 1 |  |
| Orthologous gene family | SI005G37690 | 1 | ||
| Anchor point | SI003G21280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SI005G37700 SI005G37690 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT2G38290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G38290 | 1 | ||
| Brachypodium distachyon | Tree-based ortholog | 1-to-1 | BD2G22670 | 1 | |
| Anchor point | 1-to-1 | BD2G22670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD2G22670 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00120G00270 | 1 | |
| Orthologous gene family | 1-to-1 | CP00437G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00120G00270 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR13G01930 CR14G04950 CR07G10170 | 3 | |
| Hordeum vulgare | Tree-based ortholog | 1-to-1 | HV54878G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV54878G00010 | 1 | ||
| Musa acuminata | Tree-based ortholog | 1-to-1 | MA04G19340 | 1 | |
| Orthologous gene family | 1-to-many | MA01G14770 MA05G26710 MA08G16670 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MA04G19340 | 1 | ||
| Oryza sativa ssp. indica | Tree-based ortholog | 1-to-1 | OSINDICA_01G58190 | 1 | |
| Orthologous gene family | 1-to-1 | OSINDICA_01G58230 | 1 | ||
| Anchor point | 1-to-many | OSINDICA_05G35180 OSINDICA_01G58190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G58190 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS01G61510 | 1 | |
| Anchor point | 1-to-many | OS01G61510 OS05G39240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G61510 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL07G01980 OL05G00520 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL07G01980 OL05G00520 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00057G00450 PP00004G00740 PP00012G01940 ... | 11 | |
| Orthologous gene family | 1-to-many | PP00030G01380 PP00120G00810 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00004G00740 PP00030G01380 PP00240G00280 ... | 7 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT06G10280 PT16G12140 | 2 | |
| Orthologous gene family | 1-to-1 | PT05G21600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT16G12140 PT06G10280 | 2 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL10G076480 | 1 | |
| Anchor point | 1-to-1 | SL10G076480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G076480 | 1 | ||
| Sorghum bicolor | Tree-based ortholog | 1-to-1 | SB04G018980 | 1 | |
| Anchor point | 1-to-many | SB09G023030 SB03G038840 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB03G038840 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV07G07670 VV07G07710 | 2 | |
| Anchor point | 1-to-1 | VV08G06860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G07710 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM07G15300 | 1 | |
| Anchor point | 1-to-1 | ZM06G26130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G26130 | 1 |