Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI005G37340
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Orthologous gene family | SI005G37340 | 1 |  |
| Anchor point | SI003G20970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SI005G37340 | 1 | ||
| Tree-based ortholog | SI005G37340 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT3G10980 AT5G05350 | 2 | |
| Tree-based ortholog | 1-to-1 | AT5G05350 | 1 | ||
| Brachypodium distachyon | Anchor point | 1-to-many | BD2G22430 BD2G53740 BD4G44700 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G53740 | 1 | ||
| Tree-based ortholog | 1-to-1 | BD2G53740 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00019G01060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00033G00940 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00033G00940 | 1 | ||
| Hordeum vulgare | Orthologous gene family | 1-to-1 | HV37709G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV37709G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | HV37709G00010 | 1 | ||
| Musa acuminata | Anchor point | 1-to-many | MA07G22780 MA05G28790 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA11G20330 MA11G10910 | 2 | ||
| Tree-based ortholog | 1-to-1 | MA05G28790 | 1 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-many | OSINDICA_03G17570 OSINDICA_12G01060 OSINDICA_05G35570 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_01G57700 | 1 | ||
| Tree-based ortholog | 1-to-1 | OSINDICA_11G00300 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS01G61060 | 1 | |
| Anchor point | 1-to-many | OS03G18790 OS01G61060 OS05G39730 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G61060 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS01G61060 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00298G00330 PP00019G00080 PP00353G00040 | 3 | |
| Tree-based ortholog | 1-to-many | PP00360G00070 PP00298G00330 PP00353G00040 | 3 | ||
| Populus trichocarpa | Anchor point | 1-to-many | PT08G07530 PT16G12970 PT10G18210 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT16G12970 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT10G18210 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G048790 | 1 | |
| Sorghum bicolor | Orthologous gene family | 1-to-1 | SB03G038490 | 1 | |
| Anchor point | 1-to-many | SB03G038490 SB09G023280 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB03G038490 | 1 | ||
| Tree-based ortholog | 1-to-1 | SB03G038490 | 1 | ||
| Vitis vinifera | Anchor point | 1-to-many | VV08G06260 VV13G09710 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G09710 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV13G09710 | 1 | ||
| Zea mays | Anchor point | 1-to-many | ZM08G18150 ZM03G28140 ZM08G32700 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G28140 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM10G00150 | 1 |