Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI005G34060
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Orthologous gene family | SI005G34060 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | SI005G34060 | 1 | ||
| Tree-based ortholog | SI005G34060 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT5G59030 AT2G26975 AT3G46900 | 3 | |
| Tree-based ortholog | 1-to-many | AT5G59040 AT3G46900 AT2G26975 ... | 5 | ||
| Brachypodium distachyon | Anchor point | N/A | BD2G51210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G51210 | 1 | ||
| Tree-based ortholog | 1-to-1 | BD2G51210 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00056G00560 | 1 | |
| Tree-based ortholog | 1-to-many | CP00056G00560 CP00081G00490 CP00056G00570 | 3 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV38626G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | HV38626G00010 | 1 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA02G03150 MA01G08660 | 2 | |
| Tree-based ortholog | 1-to-many | MA00G28020 MA10G02310 | 2 | ||
| Oryza sativa ssp. indica | Anchor point | N/A | OSINDICA_01G53330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_01G53330 | 1 | ||
| Tree-based ortholog | 1-to-many | OSINDICA_01G53330 OSINDICA_05G31420 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | N/A | OS01G56420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G56420 | 1 | ||
| Tree-based ortholog | 1-to-many | OS01G56420 OS05G35050 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00130G00280 PP00054G00030 | 2 | |
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT09G03880 PT09G03870 | 2 | |
| Tree-based ortholog | 1-to-many | PT06G09320 PT09G03870 PT09G03880 ... | 5 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL08G006250 SL06G005820 | 2 | |
| Tree-based ortholog | 1-to-many | SL09G014870 SL09G011700 SL06G005820 ... | 5 | ||
| Sorghum bicolor | Anchor point | N/A | SB03G035840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB03G035840 | 1 | ||
| Tree-based ortholog | 1-to-1 | SB03G035840 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G02610 | 1 | |
| Tree-based ortholog | 1-to-many | VV03G00880 VV03G00900 VV06G02610 ... | 5 | ||
| Zea mays | Anchor point | N/A | ZM03G30720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G30720 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM03G30720 | 1 |