Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI003G24130
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Orthologous gene family | SI003G24130 | 1 |  |
| Anchor point | SI005G41640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SI003G24130 | 1 | ||
| Tree-based ortholog | SI003G24130 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT1G22840 AT4G10040 | 2 | |
| Tree-based ortholog | 1-to-many | AT4G10040 AT1G22840 | 2 | ||
| Brachypodium distachyon | Anchor point | 1-to-many | BD2G25030 BD2G57160 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G25030 | 1 | ||
| Tree-based ortholog | 1-to-many | BD2G25030 BD2G57160 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00113G00140 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00113G00140 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G08520 | 1 | |
| Tree-based ortholog | 1-to-1 | CR12G08520 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV55398G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | HV55398G00010 | 1 | ||
| Musa acuminata | Anchor point | 1-to-many | MA07G24150 MA06G18980 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA06G18980 MA07G24150 | 2 | ||
| Tree-based ortholog | 1-to-1 | MA05G17420 | 1 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-many | OSINDICA_05G31070 OSINDICA_01G62790 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_05G31070 | 1 | ||
| Tree-based ortholog | 1-to-many | OSINDICA_05G31070 OSINDICA_01G62790 | 2 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS01G66180 OS05G34770 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G34770 | 1 | ||
| Tree-based ortholog | 1-to-many | OS05G34770 OS01G66180 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G02550 | 1 | |
| Tree-based ortholog | 1-to-1 | OL04G02550 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00097G01120 PP00012G00640 PP00109G00270 | 3 | |
| Tree-based ortholog | 1-to-many | PP00097G01120 PP00109G00270 PP00012G00640 ... | 4 | ||
| Populus trichocarpa | Anchor point | 1-to-1 | PT13G10160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT00G07040 PT13G10160 | 2 | ||
| Tree-based ortholog | 1-to-1 | PT04G22710 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G103220 | 1 | |
| Tree-based ortholog | 1-to-1 | SL01G103220 | 1 | ||
| Sorghum bicolor | Anchor point | 1-to-many | SB09G020710 SB03G042000 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB09G020710 | 1 | ||
| Tree-based ortholog | 1-to-1 | SB09G020710 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G23270 | 1 | |
| Tree-based ortholog | 1-to-1 | VV00G23270 | 1 | ||
| Zea mays | Anchor point | 1-to-many | ZM08G15600 ZM03G24870 ZM06G24510 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G24510 | 1 | ||
| Tree-based ortholog | 1-to-1 | ZM06G24510 | 1 |