Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI002G03340
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Orthologous gene family | SI002G03340 | 1 |  |
| Anchor point | SI009G06290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SI002G03340 | 1 | ||
| Tree-based ortholog | SI002G03340 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G07560 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G07560 | 1 | ||
| Brachypodium distachyon | Anchor point | 1-to-many | BD1G06440 BD1G58470 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G06440 | 1 | ||
| Tree-based ortholog | 1-to-1 | BD1G58470 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00008G00220 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00008G00220 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G02980 | 1 | |
| Tree-based ortholog | 1-to-1 | CR13G02980 | 1 | ||
| Hordeum vulgare | Orthologous gene family | 1-to-1 | HV42655G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV42655G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | HV42655G00010 | 1 | ||
| Musa acuminata | Anchor point | 1-to-many | MA05G02650 MA04G32420 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA05G02650 MA02G17750 | 2 | ||
| Tree-based ortholog | 1-to-many | MA05G02650 MA02G17750 | 2 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-many | OSINDICA_07G04420 OSINDICA_03G54560 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_07G04420 | 1 | ||
| Tree-based ortholog | 1-to-1 | OSINDICA_07G04420 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-many | OS03G57210 OS07G05810 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G05810 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS07G05810 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G01440 | 1 | |
| Tree-based ortholog | 1-to-1 | OL10G01440 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00123G00160 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00123G00160 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT14G17390 | 1 | |
| Tree-based ortholog | 1-to-many | PT14G19720 PT14G17390 PT17G01840 ... | 4 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G007700 | 1 | |
| Tree-based ortholog | 1-to-1 | SL06G007700 | 1 | ||
| Sorghum bicolor | Anchor point | 1-to-1 | SB01G005970 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB01G005970 | 1 | ||
| Tree-based ortholog | 1-to-1 | SB01G005970 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM01G55360 | 1 | |
| Anchor point | 1-to-many | ZM02G46860 ZM01G55360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G46860 ZM01G55360 | 2 | ||
| Tree-based ortholog | 1-to-1 | ZM02G46860 | 1 |