Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI001G31310
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Orthologous gene family | SI001G31310 SI004G13300 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | SI001G31310 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G13290 AT3G13300 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT3G13300 AT3G13290 | 2 | ||
| Brachypodium distachyon | Orthologous gene family | many-to-1 | BD1G43097 | 1 | |
| Anchor point | N/A | BD3G56517 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G56517 | 1 | ||
| Carica papaya | Anchor point | N/A | CP00012G00960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00012G00960 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G14350 | 1 | |
| Hordeum vulgare | Orthologous gene family | many-to-many | HV40135G00010 HV95091G00010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV95091G00010 | 1 | ||
| Musa acuminata | Orthologous gene family | many-to-many | MA03G11090 MA09G20260 | 2 | |
| Anchor point | N/A | MA03G11090 MA05G04390 MA03G04240 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA05G04390 MA03G04240 MA03G11090 ... | 4 | ||
| Oryza sativa ssp. indica | Anchor point | N/A | OSINDICA_06G17590 OSINDICA_02G47360 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_02G47360 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G49090 | 1 | |
| Anchor point | N/A | OS02G49090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G49090 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL02G00140 OL02G00150 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL02G00140 OL02G00150 | 2 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00001G02140 PP00124G00830 PP00199G00480 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00124G00830 PP00001G02140 PP00097G00390 ... | 4 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT06G00140 | 1 | |
| Solanum lycopersicum | Anchor point | N/A | SL07G065950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL10G005920 SL07G065950 | 2 | ||
| Sorghum bicolor | Anchor point | N/A | SB10G011058 SB04G029510 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB04G029510 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G19160 | 1 | |
| Zea mays | Anchor point | N/A | ZM04G22890 ZM05G38930 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G38930 | 1 |