Integrative Orthology Viewer: SBCG00940 (Sorghum bicolor)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Sorghum bicolor | Orthologous gene family | SBCG00940 SBCG01400 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | SBCG00940 SBCG01400 | 2 | ||
Tree-based ortholog | SBCG00940 SB00G01690 SBCG01400 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | N/A | ATCG00830 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATCG00830 ATCG01310 | 2 | ||
Tree-based ortholog | many-to-many | ATCG00830 ATCG01310 | 2 | ||
Brachypodium distachyon | Orthologous gene family | many-to-many | BDCG00820 BDCG01240 | 2 | |
Anchor point | N/A | BDCG00820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BDCG00820 BDCG01240 | 2 | ||
Tree-based ortholog | many-to-many | BD3G18424 BD1G05800 BDCG01240 ... | 5 | ||
Carica papaya | Orthologous gene family | many-to-1 | CPCG00840 | 1 | |
Anchor point | N/A | CPCG00840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CPCG01280 CPCG00840 | 2 | ||
Tree-based ortholog | many-to-many | CPCG01280 CPCG00840 | 2 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR07G08670 CRCG00210 | 2 | |
Anchor point | N/A | CRCG00210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRCG00210 | 1 | ||
Tree-based ortholog | many-to-1 | CRCG00210 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV64501G00010 | 1 | |
Tree-based ortholog | many-to-many | HV95035G00010 HV64501G00010 | 2 | ||
Musa acuminata | Orthologous gene family | many-to-1 | MACG00850 | 1 | |
Anchor point | N/A | MACG00850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MACG01370 MACG00850 | 2 | ||
Tree-based ortholog | many-to-many | MACG01370 MACG00850 | 2 | ||
Oryza sativa ssp. indica | Anchor point | N/A | OSINDICA_CG00460 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_00G36310 | 1 | ||
Tree-based ortholog | many-to-1 | OSINDICA_03G16980 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OSCG01580 | 1 | |
Anchor point | N/A | OSCG00950 OS07G25022 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OSCG00950 OSCG01580 | 2 | ||
Tree-based ortholog | many-to-many | OSCG00950 OSCG01580 | 2 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL01G04250 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL01G04250 | 1 | ||
Tree-based ortholog | many-to-1 | OL01G04250 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PPCG00940 | 1 | |
Anchor point | N/A | PPCG00940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPCG00940 | 1 | ||
Tree-based ortholog | many-to-1 | PPCG00940 | 1 | ||
Populus trichocarpa | Anchor point | N/A | PTCG00860 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT13G13860 PTCG00860 PTCG01430 | 3 | ||
Tree-based ortholog | many-to-many | PTCG00860 PT13G13840 PT13G13650 ... | 6 | ||
Setaria italica | Orthologous gene family | many-to-many | SICG00860 SICG01280 | 2 | |
Anchor point | N/A | SICG00860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SICG01280 SICG00860 | 2 | ||
Tree-based ortholog | many-to-many | SI012G00380 SICG01280 SICG00860 | 3 | ||
Solanum lycopersicum | Anchor point | N/A | SL01G007630 SLCG00840 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL01G007630 SLCG00840 SLCG01320 | 3 | ||
Tree-based ortholog | many-to-many | SL01G007630 SLCG00840 SLCG01320 ... | 4 | ||
Vitis vinifera | Anchor point | N/A | VVMG00770 VVCG00890 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VVCG00890 | 1 | ||
Tree-based ortholog | many-to-1 | VVCG00890 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZMCG00870 | 1 | |
Anchor point | N/A | ZMCG01550 ZMCG00870 ZM02G28840 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZMCG00870 ZMCG01550 | 2 | ||
Tree-based ortholog | many-to-many | ZMCG00550 ZM01G42910 ZM10G12390 ... | 11 |